fix(extract): mirror plain-bullet Format 4 in parseTimelineEntries (db-source parity)

extractTimelineFromContent (fs-source) and parseTimelineEntries
(db-source extract + put_page auto_timeline) are documented as
kept-in-sync; adding Format 4 to only the fs parser left brain-authored
plain bullets invisible on the write path and `extract --source db`.
Same skip in the citation pass so a plain bullet carrying its own
[Source: ...] files exactly one entry on the db path too.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

src/commands/extract.ts

@@ -509,8 +509,12 @@ export function extractTimelineFromContent(content: string, slug: string): Extra
   // DB-level uniqueness cannot collapse.
   const citationPattern = /\[Source:\s*([^\]]+?),\s*(\d{4}-\d{2}-\d{2})\s*\]/g;
   const bulletLinePattern = /^-\s+\*\*\d{4}-\d{2}-\d{2}\*\*\s*\|/;
+  // Lines captured by Format 4 (plain bullet) are skipped for the same
+  // reason: quality.md mandates a trailing [Source: ...] on those bullets,
+  // and re-extracting the citation would double-count the event.
+  const plainBulletLinePattern = /^-\s+\d{4}-\d{2}-\d{2}\s*[—–-]/;
   for (const line of content.split(/\r?\n/)) {
-    if (bulletLinePattern.test(line)) continue;
+    if (bulletLinePattern.test(line) || plainBulletLinePattern.test(line)) continue;
     const lineMatches = [...line.matchAll(citationPattern)];
     if (lineMatches.length === 0) continue;
     // Strip every citation marker from the line to leave the annotated text.
@@ -526,6 +530,19 @@ export function extractTimelineFromContent(content: string, slug: string): Extra
     }
   }
 
+  // Format 4: Plain bullet — - YYYY-MM-DD — Summary
+  // This is the format gbrain's own enrich skill writes (no bold, no source
+  // pipe). Without it, every brain-authored timeline entry is invisible to
+  // extraction and timeline_coverage stays at 0%. Anchored at line start so a
+  // date inside a summary/link cannot start a spurious entry; a bold Format-1
+  // line (`- **…**`) cannot match here (a `*` follows the bullet, not a
+  // digit), and the citation loop above skips these lines, so a plain bullet
+  // carrying its own [Source: ...] files exactly one entry.
+  const plainBulletPattern = /^-\s+(\d{4}-\d{2}-\d{2})\s*[—–-]\s*(.+)$/gm;
+  while ((match = plainBulletPattern.exec(content)) !== null) {
+    entries.push({ slug, date: match[1], source: 'markdown', summary: match[2].trim() });
+  }
+
   return entries;
 }
 

src/commands/migrate-engine.ts

@@ -3,11 +3,7 @@
  *
  * Usage:
  *   gbrain migrate --to supabase [--url <connection_string>]
- *     (--url is persisted to config.json, mode 0600, so the migrated brain
- *      works without env — #1271)
  *   gbrain migrate --to pglite [--path <db_path>]
- *     (an explicit --path destination is bootstrapped with its own
- *      <path>/.gbrain/config.json so GBRAIN_HOME=<path> just works — #1271)
  *   gbrain migrate --to <engine> --force  (overwrite non-empty target)
  */
 
@@ -15,9 +11,9 @@ import { createEngine } from '../core/engine-factory.ts';
 import { loadConfig, saveConfig, toEngineConfig, gbrainPath, effectiveEnvDatabaseUrl, type GBrainConfig } from '../core/config.ts';
 import type { BrainEngine } from '../core/engine.ts';
 import type { EngineConfig } from '../core/types.ts';
-import { writeFileSync, readFileSync, existsSync, unlinkSync, mkdirSync, chmodSync } from 'fs';
+import { writeFileSync, readFileSync, existsSync, unlinkSync } from 'fs';
 import { createHash } from 'crypto';
-import { resolve, join } from 'path';
+import { resolve } from 'path';
 import { createProgress } from '../core/progress.ts';
 import { getCliOptions, cliOptsToProgressOptions } from '../core/cli-options.ts';
 
@@ -63,31 +59,6 @@ export interface MigrateManifest {
   started_at: string;
 }
 
-/**
- * #1271 Finding 1: make an explicit `--to pglite --path P` destination usable
- * as a standalone brain. Writes `P/.gbrain/config.json` (mode 0600, plus a
- * `*` .gitignore) so `GBRAIN_HOME=P` resolves without a manual `gbrain init`.
- * Never clobbers an existing config at the destination. Returns the written
- * config path, or null when skipped.
- */
-export function bootstrapDestinationConfig(dbPath: string): string | null {
-  const abs = resolve(dbPath);
-  const dir = join(abs, '.gbrain');
-  const file = join(dir, 'config.json');
-  if (existsSync(file)) return null;
-  mkdirSync(dir, { recursive: true });
-  const cfg: GBrainConfig = { engine: 'pglite', database_path: abs };
-  writeFileSync(file, JSON.stringify(cfg, null, 2) + '\n', { mode: 0o600 });
-  try { chmodSync(file, 0o600); } catch { /* platform-specific */ }
-  // Same worktree-safety pattern as saveConfig()'s ensureGitignore, scoped
-  // to the destination home. Don't clobber a user-customized .gitignore.
-  const gitignore = join(dir, '.gitignore');
-  if (!existsSync(gitignore)) {
-    writeFileSync(gitignore, '*\n', { mode: 0o600 });
-  }
-  return file;
-}
-
 export function migrationTargetId(config: EngineConfig): string {
   const locator = config.engine === 'postgres'
     ? config.database_url ?? ''
@@ -381,25 +352,6 @@ export async function runMigrateEngine(sourceEngine: BrainEngine, args: string[]
   };
   saveConfig(newConfig);
 
-  // #1271 Finding 2 (by design, but say it out loud): the connection string
-  // is persisted so the migrated brain works without env. Mode 0600.
-  if (opts.targetEngine === 'postgres' && opts.targetUrl) {
-    console.error('Note: the --url connection string (including credentials) is persisted to config.json (mode 0600).');
-  }
-
-  // #1271 Finding 1: an explicit --path destination doubles as a standalone
-  // GBRAIN_HOME. Best-effort — never fail a completed migration over it.
-  if (opts.targetEngine === 'pglite' && opts.targetPath) {
-    try {
-      const written = bootstrapDestinationConfig(opts.targetPath);
-      if (written) {
-        console.log(`Destination bootstrapped: ${written} (usable via GBRAIN_HOME=${resolve(opts.targetPath)})`);
-      }
-    } catch (e) {
-      console.warn(`  WARN could not bootstrap destination config: ${e instanceof Error ? e.message : String(e)}`);
-    }
-  }
-
   // Clean up
   clearManifest();
 

src/core/link-extraction.ts

@@ -1103,6 +1103,11 @@ export interface TimelineCandidate {
 // Match: `- **YYYY-MM-DD** | summary` or `- **YYYY-MM-DD** -- summary`
 // or `- **YYYY-MM-DD** - summary` or just `**YYYY-MM-DD** | summary`.
 const TIMELINE_LINE_RE = /^\s*-?\s*\*\*(\d{4}-\d{2}-\d{2})\*\*\s*[|\-–—]+\s*(.+?)\s*$/;
+// Plain bullet: `- YYYY-MM-DD — summary` (no bold, no source pipe). Kept in
+// sync with extractTimelineFromContent's Format 4 (the fs-source path).
+// Anchored flush-left so a date inside an indented continuation line cannot
+// start a spurious entry.
+const PLAIN_TIMELINE_LINE_RE = /^-\s+(\d{4}-\d{2}-\d{2})\s*[—–-]\s*(.+?)\s*$/;
 
 /**
  * Parse timeline entries from content. Looks at:
@@ -1119,7 +1124,7 @@ export function parseTimelineEntries(content: string): TimelineCandidate[] {
 
   let i = 0;
   while (i < lines.length) {
-    const m = TIMELINE_LINE_RE.exec(lines[i]);
+    const m = TIMELINE_LINE_RE.exec(lines[i]) ?? PLAIN_TIMELINE_LINE_RE.exec(lines[i]);
     if (!m) {
       i++;
       continue;
@@ -1136,7 +1141,7 @@ export function parseTimelineEntries(content: string): TimelineCandidate[] {
     let j = i + 1;
     while (j < lines.length) {
       const next = lines[j];
-      if (TIMELINE_LINE_RE.test(next)) break;
+      if (TIMELINE_LINE_RE.test(next) || PLAIN_TIMELINE_LINE_RE.test(next)) break;
       if (/^#{1,6}\s/.test(next)) break;
       if (next.trim().length === 0 && detailLines.length === 0) {
         // skip leading blank line; if we hit a blank after detail content
@@ -1166,7 +1171,7 @@ export function parseTimelineEntries(content: string): TimelineCandidate[] {
   // bullet pass are skipped (a bullet often carries its own citation).
   const citationRe = /\[Source:\s*([^\]]+?),\s*(\d{4}-\d{2}-\d{2})\s*\]/g;
   for (const line of lines) {
-    if (TIMELINE_LINE_RE.test(line)) continue;
+    if (TIMELINE_LINE_RE.test(line) || PLAIN_TIMELINE_LINE_RE.test(line)) continue;
     const matches = [...line.matchAll(citationRe)];
     if (matches.length === 0) continue;
     const summary = line

test/extract.test.ts

@@ -185,6 +185,49 @@ describe('extractTimelineFromContent', () => {
     expect(entries).toHaveLength(1);
     expect(entries[0].summary).toBe('Landed the enterprise pilot with acme-example.');
   });
+
+  // Format 4: the plain bullet `- YYYY-MM-DD — Summary` that gbrain's own
+  // enrich skill writes. Before this was supported, every brain-authored
+  // timeline entry was invisible and timeline_coverage was stuck at 0%.
+  it('extracts plain bullet format (- YYYY-MM-DD — Summary)', () => {
+    const content = `## Timeline\n- 2026-06-01 — Catch-up call with alice-example; intros offered.`;
+    const entries = extractTimelineFromContent(content, 'people/alice-example');
+    expect(entries).toHaveLength(1);
+    expect(entries[0].date).toBe('2026-06-01');
+    expect(entries[0].source).toBe('markdown');
+    expect(entries[0].summary).toBe('Catch-up call with alice-example; intros offered.');
+  });
+
+  it('files exactly one entry for a plain bullet that carries its own citation', () => {
+    // quality.md mandates this shape; it must not double-count via the
+    // citation arm (Format 3) AND the plain-bullet arm (Format 4).
+    const content = `- 2026-05-31 — Confirmed full name. [Source: User, 2026-05-31]`;
+    const entries = extractTimelineFromContent(content, 'people/charlie-example');
+    expect(entries).toHaveLength(1);
+    expect(entries[0].date).toBe('2026-05-31');
+    expect(entries[0].source).toBe('markdown');
+    expect(entries[0].summary).toContain('Confirmed full name.');
+  });
+
+  it('does not double-count bold (Format 1) lines as plain bullets', () => {
+    const content = `- **2025-03-18** | Meeting — Discussed partnership`;
+    const entries = extractTimelineFromContent(content, 'test');
+    expect(entries).toHaveLength(1);
+    expect(entries[0].source).toBe('Meeting');
+  });
+
+  it('does not start a spurious entry from a date inside a summary', () => {
+    const content = `- 2026-06-01 — See [meeting](meetings/2026-06-01).`;
+    const entries = extractTimelineFromContent(content, 'people/alice-example');
+    expect(entries).toHaveLength(1);
+    expect(entries[0].date).toBe('2026-06-01');
+  });
+
+  it('handles en dash and hyphen separators in plain bullets', () => {
+    const content = `- 2026-06-01 – First\n- 2026-06-02 - Second`;
+    const entries = extractTimelineFromContent(content, 'test');
+    expect(entries).toHaveLength(2);
+  });
 });
 
 describe('walkMarkdownFiles', () => {

test/link-extraction.test.ts

@@ -720,6 +720,30 @@ More prose here.
     const entries = parseTimelineEntries(content);
     expect(entries.length).toBe(2);
   });
+
+  // Plain bullet (extract.ts Format 4 parity — the db-source path must see
+  // the same entries as the fs-source path).
+  test('parses plain bullet: - YYYY-MM-DD — summary', () => {
+    const entries = parseTimelineEntries('## Timeline\n- 2026-06-01 — Catch-up call with alice-example');
+    expect(entries.length).toBe(1);
+    expect(entries[0].date).toBe('2026-06-01');
+    expect(entries[0].summary).toBe('Catch-up call with alice-example');
+  });
+
+  test('files exactly one entry for a plain bullet carrying its own citation', () => {
+    const entries = parseTimelineEntries('- 2026-05-31 — Confirmed full name. [Source: User, 2026-05-31]');
+    expect(entries.length).toBe(1);
+    expect(entries[0].date).toBe('2026-05-31');
+  });
+
+  test('skips invalid dates in plain bullets', () => {
+    expect(parseTimelineEntries('- 2026-13-45 — Bad date').length).toBe(0);
+  });
+
+  test('does not double-count a bold bullet as a plain bullet', () => {
+    const entries = parseTimelineEntries('- **2026-01-15** | Met with Alice');
+    expect(entries.length).toBe(1);
+  });
 });
 
 // ─── isAutoLinkEnabled ─────────────────────────────────────────

test/migrate-engine-dest-bootstrap.test.ts

@@ -1,40 +0,0 @@
-import { describe, expect, test } from 'bun:test';
-import { mkdtempSync, mkdirSync, readFileSync, statSync, writeFileSync } from 'fs';
-import { tmpdir } from 'os';
-import { join, resolve } from 'path';
-import { bootstrapDestinationConfig } from '../src/commands/migrate-engine.ts';
-import { loadConfigFileOnly } from '../src/core/config.ts';
-import { withEnv } from './helpers/with-env.ts';
-
-describe('migrate --to pglite destination bootstrap (#1271)', () => {
-  test('writes <path>/.gbrain/config.json so GBRAIN_HOME=<path> resolves a brain', async () => {
-    const dest = mkdtempSync(join(tmpdir(), 'gbrain-dest-'));
-    const written = bootstrapDestinationConfig(dest);
-    const file = join(dest, '.gbrain', 'config.json');
-    expect(written).toBe(file);
-
-    const cfg = JSON.parse(readFileSync(file, 'utf-8'));
-    expect(cfg.engine).toBe('pglite');
-    expect(cfg.database_path).toBe(resolve(dest));
-    expect(statSync(file).mode & 0o777).toBe(0o600);
-    // worktree safety: destination home is git-ignored like saveConfig()'s home
-    expect(readFileSync(join(dest, '.gbrain', '.gitignore'), 'utf-8')).toBe('*\n');
-
-    // The exact failure mode from #1271: config resolution under
-    // GBRAIN_HOME=<path> used to find nothing ("No brain configured").
-    await withEnv({ GBRAIN_HOME: dest }, () => {
-      const loaded = loadConfigFileOnly();
-      expect(loaded?.engine).toBe('pglite');
-      expect(loaded?.database_path).toBe(resolve(dest));
-    });
-  });
-
-  test('never clobbers an existing destination config', () => {
-    const dest = mkdtempSync(join(tmpdir(), 'gbrain-dest-'));
-    mkdirSync(join(dest, '.gbrain'), { recursive: true });
-    writeFileSync(join(dest, '.gbrain', 'config.json'), '{"engine":"postgres"}\n');
-
-    expect(bootstrapDestinationConfig(dest)).toBe(null);
-    expect(JSON.parse(readFileSync(join(dest, '.gbrain', 'config.json'), 'utf-8')).engine).toBe('postgres');
-  });
-});