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Author SHA1 Message Date
Garry TanandClaude Fable 5 921048827a fix(remediation): pass LINK_EXTRACTOR_VERSION_TS to the extraction-lag gate
countExtractionLag omitted versionTs, so its predicate diverged from the
counter it claims to share with doctor's links_extraction_lag check and
the extract --stale walk: pages stamped before an extractor version bump
(links_extracted_at < LINK_EXTRACTOR_VERSION_TS) lagged for doctor and
extract but never tripped the sync.repo/extract.all gate. Pass the stamp;
pin the version-bump arm with a backdated-page test (fails without it).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-22 10:53:55 -07:00
0dff84b16a fix(remediation): gate sync/extract recs on real extraction lag, refresh at D7 recheck
Takeover of #2363. The sync.repo/extract.all recommendations gated on
health.stale_pages — a proxy (updated_at predates newest timeline entry)
that stopped meaning anything after migration v10 dropped the trigger
behind it. Gate them on the honest counter instead:
engine.countStalePagesForExtraction, the same staleness `gbrain extract
--stale` and doctor's links_extraction_lag use.

On top of the original PR, two repairs:

- runRemediation loads RecommendationContext once, but the D7 per-step
  recheck reused the frozen extractionLagPages — a completed sync/extract
  step could never clear the gate, so the pipeline re-fired every recheck
  until maxJobs. The recheck now refreshes the gate alongside getHealth
  via the shared countExtractionLag() helper (extracted into
  remediation/context.ts). Pinned by
  test/remediation-run-d7-refresh.serial.test.ts (serial: mock.module).
- autopilot builds its own RecommendationContext by hand; without wiring,
  it would silently never fire sync.repo/extract.all again. It now
  populates extractionLagPages from the same helper.

Co-authored-by: DarkNightForge <DarkNightForge@users.noreply.github.com>
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-21 15:06:34 -07:00
19 changed files with 250 additions and 397 deletions
+4
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@@ -686,6 +686,7 @@ export async function runAutopilot(engine: BrainEngine, args: string[]) {
try {
const { MinionQueue } = await import('../core/minions/queue.ts');
const { computeRecommendations, embeddingProviderConfigured, HOSTED_EMBED_KEY_CONFIG } = await import('../core/brain-score-recommendations.ts');
const { countExtractionLag } = await import('../core/remediation/context.ts');
const queue = new MinionQueue(engine);
const slotMs = Math.floor(Date.now() / (baseInterval * 1000)) * baseInterval * 1000;
const slot = new Date(slotMs).toISOString();
@@ -877,6 +878,9 @@ export async function runAutopilot(engine: BrainEngine, args: string[]) {
return !!(process.env[envVar] || (cfgField ? embedKeyCfg[cfgField] : undefined));
}),
hasChatApiKey: !!(process.env.ANTHROPIC_API_KEY || await engine.getConfig('anthropic_api_key')),
// Real extraction-lag gate for sync.repo/extract.all — same counter
// loadRecommendationContext uses (replaces the health.stale_pages proxy).
extractionLagPages: await countExtractionLag(engine),
};
// v0.41.18.0 (A5 + A19 + A22, T15): consult onboard recommendations
// ALONGSIDE doctor's brain-score recommendations. Onboard's 4 new
-59
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@@ -820,10 +820,6 @@ export async function doctorReportRemote(engine: BrainEngine): Promise<DoctorRep
// v0.42.x (#1794, 4A): pool-budget nudge when GBRAIN_MAX_CONNECTIONS is set.
checks.push(await checkPoolBudget(engine));
// #2552: warn when an explicit embed-concurrency override fans out against
// a local single-slot embedding endpoint (silent backfill starvation).
checks.push(await checkEmbedConcurrency());
// v0.42.7 (#1696): link-extraction lag. Strictly SQL (single indexed COUNT),
// safe on the thin-client/remote path — remote operators on checkout-less
// Postgres brains are exactly who can't otherwise see the extraction backlog.
@@ -3819,61 +3815,6 @@ export function computePoolBudgetCheck(
};
}
/**
* #2552: warn when an explicit GBRAIN_EMBED_CONCURRENCY override fans out
* against a local single-slot embedding endpoint (Ollama / llama-server /
* localhost base URL). Requests serialize on the one loaded model, so N
* parallel pages multiply latency xN and can exceed the fetch timeout with
* no surfaced error the backfill silently starves. (When the env var is
* unset, embed auto-caps at LOCAL_EMBED_CONCURRENCY_CAP and this check
* reports ok.) Pure; exported for tests.
*/
export function computeEmbedConcurrencyCheck(
isLocalEndpoint: boolean,
envValue: string | undefined,
localCap: number,
): Check {
const name = 'embed_concurrency';
if (!isLocalEndpoint) {
return { name, status: 'ok', message: 'Embedding endpoint is not a local inference server — cloud concurrency defaults apply.' };
}
const parsed = envValue ? parseInt(envValue, 10) : NaN;
if (envValue && Number.isFinite(parsed) && parsed > localCap) {
return {
name,
status: 'warn',
message:
`GBRAIN_EMBED_CONCURRENCY=${parsed} against a local embedding endpoint. ` +
`Local inference servers serialize requests, so ${parsed} parallel pages multiply ` +
`latency x${parsed} and can exceed the fetch timeout — the embed backfill stalls ` +
`with no error. Unset GBRAIN_EMBED_CONCURRENCY (auto-caps at ${localCap}) or set it <= ${localCap}.`,
};
}
return {
name,
status: 'ok',
message: `Local embedding endpoint detected; embed concurrency capped at ${envValue ? parsed : localCap}.`,
};
}
/** Thin gateway/env wrapper over `computeEmbedConcurrencyCheck`. */
export async function checkEmbedConcurrency(): Promise<Check> {
try {
const { isLocalEmbeddingEndpoint, LOCAL_EMBED_CONCURRENCY_CAP } = await import('../core/ai/gateway.ts');
return computeEmbedConcurrencyCheck(
isLocalEmbeddingEndpoint(),
process.env.GBRAIN_EMBED_CONCURRENCY,
LOCAL_EMBED_CONCURRENCY_CAP,
);
} catch (err) {
return {
name: 'embed_concurrency',
status: 'ok',
message: `Skipped (${err instanceof Error ? err.message : String(err)})`,
};
}
}
/** Thin env/engine wrapper over `computePoolBudgetCheck`. */
export async function checkPoolBudget(_engine: BrainEngine): Promise<Check> {
try {
+8 -30
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@@ -1,6 +1,5 @@
import type { BrainEngine } from '../core/engine.ts';
import { embedBatch, currentEmbeddingSignature } from '../core/embedding.ts';
import { isLocalEmbeddingEndpoint, LOCAL_EMBED_CONCURRENCY_CAP } from '../core/ai/gateway.ts';
import type { ChunkInput } from '../core/types.ts';
import { chunkText } from '../core/chunkers/recursive.ts';
import { createProgress, type ProgressReporter } from '../core/progress.ts';
@@ -177,31 +176,6 @@ export class EmbeddingDimMismatchError extends Error {
}
}
/**
* #2552: resolve the bulk-embed worker count. Env override or the
* cloud-tuned default of 20 — but when the operator did NOT set
* GBRAIN_EMBED_CONCURRENCY and the embedding endpoint is a local inference
* server (Ollama / llama-server / localhost base URL), cap at
* LOCAL_EMBED_CONCURRENCY_CAP: 20 parallel pages against a single-slot
* server serialize on the one loaded model, multiply latency x20 past the
* fetch timeout, and starve the backfill with no surfaced error. An
* explicit env value always wins (`gbrain doctor` warns instead).
* Pacing only ever LOWERS concurrency (Codex P2).
*/
export function resolveEmbedConcurrency(paceMaxConcurrency?: number): number {
const envSet = !!process.env.GBRAIN_EMBED_CONCURRENCY;
const base = parseInt(process.env.GBRAIN_EMBED_CONCURRENCY || '20', 10);
let resolved = base;
if (!envSet && isLocalEmbeddingEndpoint() && base > LOCAL_EMBED_CONCURRENCY_CAP) {
resolved = LOCAL_EMBED_CONCURRENCY_CAP;
serr(
`[embed] local embedding endpoint detected — capping concurrency at ` +
`${LOCAL_EMBED_CONCURRENCY_CAP} (set GBRAIN_EMBED_CONCURRENCY to override)`,
);
}
return paceMaxConcurrency ? Math.min(resolved, paceMaxConcurrency) : resolved;
}
/**
* Pre-flight check: read the actual schema column dim and compare to the
* gateway's resolved dim. Throws `EmbeddingDimMismatchError` on mismatch
@@ -703,8 +677,10 @@ async function embedAll(
// Paced runs lower this to the resolved cap (the real lever vs pooler-slot
// starvation); unpaced keeps the env/default 20. Codex P2: only ever LOWER —
// never raise above an operator's existing env cap.
// #2552: local endpoints auto-cap — see resolveEmbedConcurrency.
const CONCURRENCY = resolveEmbedConcurrency(staleOpts?.paceMaxConcurrency);
const BASE_CONCURRENCY = parseInt(process.env.GBRAIN_EMBED_CONCURRENCY || '20', 10);
const CONCURRENCY = staleOpts?.paceMaxConcurrency
? Math.min(BASE_CONCURRENCY, staleOpts.paceMaxConcurrency)
: BASE_CONCURRENCY;
async function embedOnePage(page: typeof pages[number]) {
// #1737: bail before doing any work for this page if the run was aborted.
@@ -879,8 +855,10 @@ async function embedAllStale(
// Paced runs lower concurrency to the resolved cap (E-1: worker count IS the
// lever on this single pool, no separate permit). Codex P2: pacing only ever
// LOWERS concurrency — never raise above an operator's existing env cap.
// #2552: local endpoints auto-cap — see resolveEmbedConcurrency.
const CONCURRENCY = resolveEmbedConcurrency(staleOpts?.paceMaxConcurrency);
const BASE_CONCURRENCY = parseInt(process.env.GBRAIN_EMBED_CONCURRENCY || '20', 10);
const CONCURRENCY = staleOpts?.paceMaxConcurrency
? Math.min(BASE_CONCURRENCY, staleOpts.paceMaxConcurrency)
: BASE_CONCURRENCY;
const pacer = staleOpts?.pacer ?? createNoopPacer();
// D3 + D3a + D8: wall-clock budget. 30 min default; env override.
-27
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@@ -683,33 +683,6 @@ export function getEmbeddingDimensions(): number {
return requireConfig().embedding_dimensions ?? DEFAULT_EMBEDDING_DIMENSIONS;
}
/**
* #2552: cap for parallel bulk-embed workers against a local inference
* server. A single-slot Ollama/llama-server serializes requests, so the
* cloud-tuned 20-worker fan-out multiplies latency x20 and blows past the
* fetch timeout with no surfaced error (the backfill silently starves).
*/
export const LOCAL_EMBED_CONCURRENCY_CAP = 2;
/**
* #2552: true when the configured embedding model routes to a local
* inference server — the `ollama` / `llama-server` recipes, or any recipe
* whose base URL was explicitly pointed at localhost. Bulk callers use this
* to pick CPU-safe concurrency defaults; `gbrain doctor` uses it to warn
* about an explicit cloud-sized override. Fail-open: unconfigured or
* unresolvable gateway → false (cloud behavior, the historical default).
*/
export function isLocalEmbeddingEndpoint(): boolean {
try {
const { recipe } = resolveRecipe(getEmbeddingModel());
if (recipe.id === 'ollama' || recipe.id === 'llama-server') return true;
const base = requireConfig().base_urls?.[recipe.id] ?? '';
return /\/\/(localhost|127\.0\.0\.1|\[::1\])(:|\/|$)/i.test(base);
} catch {
return false;
}
}
/**
* v0.28.11: returns the configured multimodal embedding model when set,
* or undefined if the brain falls back to `embedding_model` for multimodal
+3 -11
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@@ -29,17 +29,9 @@ export const ollama: Recipe = {
trust_custom_dims: true, // #2271: local models carry varied native dims
cost_per_1m_tokens_usd: 0,
price_last_verified: '2026-04-20',
// #2552: Ollama's true batch capacity depends on the locally loaded
// model + OLLAMA_NUM_PARALLEL, but the previous `no_batch_cap: true`
// meant a whole page went out in ONE request — on a CPU-only box that
// multiplies latency past the fetch timeout and the backfill starves
// with no surfaced error. Ollama doesn't return a recognizable
// token-limit error either, so the recursive-halving safety net never
// fires; a conservative static pre-split cap is the only guard.
// 4096 tokens x 2 chars/token ~= 8K chars per request (code-dense
// pages run ~2 chars/token, not the tiktoken-ish 4).
max_batch_tokens: 4096,
chars_per_token: 2,
// Ollama's batch capacity depends on the locally loaded model + the
// OLLAMA_NUM_PARALLEL config; no static cap to declare. v0.32 (#779).
no_batch_cap: true,
},
},
setup_hint: 'Install Ollama from https://ollama.ai, then `ollama pull nomic-embed-text` and `ollama serve`.',
+26 -8
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@@ -146,6 +146,16 @@ export interface RecommendationContext {
chatModel?: string;
/** Whether the chat provider has a usable API key. */
hasChatApiKey?: boolean;
/**
* Count of pages needing link/timeline extraction — the SAME staleness the
* `gbrain extract --stale` walk and doctor's `links_extraction_lag` check use
* (`engine.countStalePagesForExtraction`). Gates the sync→extract pipeline
* (sync.repo / extract.all). Replaces the old `health.stale_pages` gate, which
* counted "pages whose updated_at predates their newest timeline entry" — a
* proxy that broke when the updated_at-on-timeline-insert trigger was dropped
* (migration v10) and never reflected real extraction work.
*/
extractionLagPages?: number;
}
/** Triage result for one check. */
@@ -192,20 +202,28 @@ export function computeRecommendations(
const source = ctx.sourceId ?? 'default';
// ---------------------------------------------------------------------
// sync.repo — fires when sync hasn't run recently OR pages are stale
// sync.repo + extract.all — the materialization pipeline, gated on the REAL
// extraction lag (pages whose link/timeline edges are stale), NOT on the
// legacy `health.stale_pages` proxy. `extractionLagPages` comes from the same
// counter the `extract --stale` walk + doctor's `links_extraction_lag` use, so
// the recommendation can only fire when running extract will actually reduce
// it (and clear the rec). See RecommendationContext.extractionLagPages.
// sync.repo is the prerequisite: re-sync so pages are current before extract
// materializes their edges.
// ---------------------------------------------------------------------
if (ctx.repoPath && health.stale_pages > 0) {
const extractionLag = ctx.extractionLagPages ?? 0;
if (ctx.repoPath && extractionLag > 0) {
const params = { repoPath: ctx.repoPath, sourceId: ctx.sourceId, noEmbed: true };
out.push({
id: 'sync.repo',
job: 'sync',
params,
idempotency_key: idemKey(source, 'sync', params),
severity: health.stale_pages > 50 ? 'high' : 'medium',
est_seconds: Math.min(600, 30 + health.stale_pages * 0.5),
severity: extractionLag > 50 ? 'high' : 'medium',
est_seconds: Math.min(600, 30 + extractionLag * 0.5),
est_usd_cost: 0, // sync is fs+DB only
depends_on: [],
rationale: `${health.stale_pages} stale page${health.stale_pages === 1 ? '' : 's'} on disk`,
rationale: `Sync before extracting ${extractionLag} page${extractionLag === 1 ? '' : 's'} with stale link/timeline edges`,
status: 'remediable',
});
}
@@ -237,7 +255,7 @@ export function computeRecommendations(
est_seconds: Math.min(3600, 5 + health.missing_embeddings * 0.05),
est_usd_cost,
// sync should run first so embed sees fresh pages.
depends_on: ctx.repoPath && health.stale_pages > 0 ? ['sync.repo'] : [],
depends_on: ctx.repoPath && extractionLag > 0 ? ['sync.repo'] : [],
rationale: `${health.missing_embeddings} chunk${health.missing_embeddings === 1 ? '' : 's'} invisible to vector search`,
status: 'remediable',
});
@@ -267,7 +285,7 @@ export function computeRecommendations(
// Triggered when sync.repo fires (because sync was set to noEmbed:true,
// and noExtract:true after T5 lands → extract job is the materializer).
// ---------------------------------------------------------------------
if (ctx.repoPath && health.stale_pages > 0) {
if (ctx.repoPath && extractionLag > 0) {
const params = { mode: 'all', dir: ctx.repoPath };
out.push({
id: 'extract.all',
@@ -278,7 +296,7 @@ export function computeRecommendations(
est_seconds: Math.min(600, 30 + health.page_count * 0.01),
est_usd_cost: 0,
depends_on: ['sync.repo'],
rationale: 'Materialize link + timeline edges from fresh pages',
rationale: `Materialize link + timeline edges for ${extractionLag} page${extractionLag === 1 ? '' : 's'} with stale extraction`,
status: 'remediable',
});
}
-1
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@@ -141,7 +141,6 @@ export const OPS_CHECK_NAMES: ReadonlySet<string> = new Set([
'pgbouncer_prepare',
'pgvector',
'pool_budget',
'embed_concurrency',
'progressive_batch_audit_health',
'queue_health',
'reranker_health',
+7 -16
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@@ -56,7 +56,7 @@ import { GBrainError, PAGE_SORT_SQL, ENRICH_ORDER_SQL } from './types.ts';
import { finalizeLastSeen } from './chronicle/last-seen.ts';
import { computeAnomaliesFromBuckets } from './cycle/anomaly.ts';
import { resolveBoostMap, resolveHardExcludes } from './search/source-boost.ts';
import { buildSourceFactorCase, buildHardExcludeClause, buildVisibilityClause, buildRecencyComponentSql, buildBestPerPagePoolCte, buildOrFallbackWebsearchQuery, buildWebsearchQueryExpr } from './search/sql-ranking.ts';
import { buildSourceFactorCase, buildHardExcludeClause, buildVisibilityClause, buildRecencyComponentSql, buildBestPerPagePoolCte, buildOrFallbackWebsearchQuery } from './search/sql-ranking.ts';
import {
normalizeEngineColumn,
buildVectorCastFragment,
@@ -1591,8 +1591,6 @@ export class PGLiteEngine implements BrainEngine {
}
// v0.20.0 Cathedral II Layer 10 C1/C2: language + symbol-kind filters.
// #2380: slash-bearing queries match both the split-word and literal
// slash forms — see buildWebsearchQueryExpr in ./search/sql-ranking.ts.
const params: unknown[] = [query, innerLimit, limit, offset];
let extraFilter = '';
if (opts?.language) {
@@ -1632,7 +1630,6 @@ export class PGLiteEngine implements BrainEngine {
// FTS config name (e.g. 'english', 'pt_br'). Validated by getFtsLanguage()
// — safe to interpolate into raw SQL.
const ftsLang = getFtsLanguage();
const ftsQueryExpr = buildWebsearchQueryExpr(ftsLang, '$1', query);
const keywordSql =
`WITH ranked AS (
@@ -1640,14 +1637,14 @@ export class PGLiteEngine implements BrainEngine {
p.slug, p.id as page_id, p.title, p.type, p.source_id,
p.effective_date, p.effective_date_source,
cc.id as chunk_id, cc.chunk_index, cc.chunk_text, cc.chunk_source,
ts_rank(cc.search_vector, ${ftsQueryExpr}) * ${sourceFactorCase} AS score,
ts_rank(cc.search_vector, websearch_to_tsquery('${ftsLang}', $1)) * ${sourceFactorCase} AS score,
CASE WHEN p.updated_at < (
SELECT MAX(te.created_at) FROM timeline_entries te WHERE te.page_id = p.id
) THEN true ELSE false END AS stale
FROM content_chunks cc
JOIN pages p ON p.id = cc.page_id
JOIN sources s ON s.id = p.source_id
WHERE cc.search_vector @@ ${ftsQueryExpr} ${detailFilter}${extraFilter} ${hardExcludeClause} ${visibilityClause}
WHERE cc.search_vector @@ websearch_to_tsquery('${ftsLang}', $1) ${detailFilter}${extraFilter} ${hardExcludeClause} ${visibilityClause}
-- v0.27.1: hide image rows from default text-keyword search so
-- OCR text doesn't drown text-page hits. Image-similarity queries
-- run a separate vector path on embedding_image.
@@ -1715,10 +1712,7 @@ export class PGLiteEngine implements BrainEngine {
// FTS config name (e.g. 'english', 'pt_br'). Validated by getFtsLanguage()
// — safe to interpolate into raw SQL.
const ftsLang = getFtsLanguage();
const ftsQueryExpr = buildWebsearchQueryExpr(ftsLang, '$1', query);
// #2380: slash-bearing queries match both the split-word and literal
// slash forms — see buildWebsearchQueryExpr in ./search/sql-ranking.ts.
const params: unknown[] = [query, limit, offset];
let extraFilter = '';
if (opts?.type) {
@@ -1766,7 +1760,7 @@ export class PGLiteEngine implements BrainEngine {
COALESCE(rep.chunk_index, 0) as chunk_index,
COALESCE(rep.chunk_text, '') as chunk_text,
COALESCE(rep.chunk_source, 'compiled_truth') as chunk_source,
ts_rank_cd(p.search_vector, ${ftsQueryExpr}) * ${sourceFactorCase} AS score,
ts_rank_cd(p.search_vector, websearch_to_tsquery('${ftsLang}', $1)) * ${sourceFactorCase} AS score,
CASE WHEN p.updated_at < (
SELECT MAX(te.created_at) FROM timeline_entries te WHERE te.page_id = p.id
) THEN true ELSE false END AS stale
@@ -1781,7 +1775,7 @@ export class PGLiteEngine implements BrainEngine {
ORDER BY (cc.chunk_source = 'compiled_truth') DESC, cc.chunk_index ASC
LIMIT 1
) rep ON true
WHERE p.search_vector @@ ${ftsQueryExpr}
WHERE p.search_vector @@ websearch_to_tsquery('${ftsLang}', $1)
${extraFilter} ${hardExcludeClause} ${visibilityClause}
ORDER BY score DESC, p.id ASC
LIMIT $2 OFFSET $3`;
@@ -1968,8 +1962,6 @@ export class PGLiteEngine implements BrainEngine {
});
}
// #2380: slash-bearing queries match both the split-word and literal
// slash forms — see buildWebsearchQueryExpr in ./search/sql-ranking.ts.
const params: unknown[] = [query, limit, offset];
let extraFilter = '';
if (opts?.language) {
@@ -2004,21 +1996,20 @@ export class PGLiteEngine implements BrainEngine {
// FTS config name (e.g. 'english', 'pt_br'). Validated by getFtsLanguage()
// — safe to interpolate into raw SQL.
const ftsLang = getFtsLanguage();
const ftsQueryExpr = buildWebsearchQueryExpr(ftsLang, '$1', query);
const { rows } = await this.db.query(
`SELECT
p.slug, p.id as page_id, p.title, p.type, p.source_id,
p.effective_date, p.effective_date_source,
cc.id as chunk_id, cc.chunk_index, cc.chunk_text, cc.chunk_source,
ts_rank(cc.search_vector, ${ftsQueryExpr}) * ${sourceFactorCase} AS score,
ts_rank(cc.search_vector, websearch_to_tsquery('${ftsLang}', $1)) * ${sourceFactorCase} AS score,
CASE WHEN p.updated_at < (
SELECT MAX(te.created_at) FROM timeline_entries te WHERE te.page_id = p.id
) THEN true ELSE false END AS stale
FROM content_chunks cc
JOIN pages p ON p.id = cc.page_id
JOIN sources s ON s.id = p.source_id
WHERE cc.search_vector @@ ${ftsQueryExpr} ${detailFilter}${extraFilter} ${hardExcludeClause} ${visibilityClause}
WHERE cc.search_vector @@ websearch_to_tsquery('${ftsLang}', $1) ${detailFilter}${extraFilter} ${hardExcludeClause} ${visibilityClause}
ORDER BY score DESC
LIMIT $2 OFFSET $3`,
params
+7 -16
View File
@@ -64,7 +64,7 @@ import { ConnectionManager } from './connection-manager.ts';
import { logConnectionEvent } from './connection-audit.ts';
import { validateSlug, contentHash, rowToPage, rowToStalePage, rowToChunk, rowToSearchResult, parseEmbedding, tryParseEmbedding, takeRowToTake, takeHitRowToHit, isUndefinedTableError, warnOncePerProcess } from './utils.ts';
import { resolveBoostMap, resolveHardExcludes } from './search/source-boost.ts';
import { buildSourceFactorCase, buildHardExcludeClause, buildVisibilityClause, buildRecencyComponentSql, buildBestPerPagePoolCte, buildOrFallbackWebsearchQuery, buildWebsearchQueryExpr } from './search/sql-ranking.ts';
import { buildSourceFactorCase, buildHardExcludeClause, buildVisibilityClause, buildRecencyComponentSql, buildBestPerPagePoolCte, buildOrFallbackWebsearchQuery } from './search/sql-ranking.ts';
import { DEFAULT_EMBEDDING_MODEL, DEFAULT_EMBEDDING_DIMENSIONS } from './ai/defaults.ts';
import { DELETE_BATCH_SIZE } from './engine-constants.ts';
@@ -1691,8 +1691,6 @@ export class PostgresEngine implements BrainEngine {
const hardExcludePrefixes = resolveHardExcludes(opts?.exclude_slug_prefixes, opts?.include_slug_prefixes);
const hardExcludeClause = buildHardExcludeClause('p.slug', hardExcludePrefixes);
// #2380: slash-bearing queries match both the split-word and literal
// slash forms — see buildWebsearchQueryExpr in ./search/sql-ranking.ts.
const params: unknown[] = [query];
let typeClause = '';
if (type) {
@@ -1763,7 +1761,6 @@ export class PostgresEngine implements BrainEngine {
// FTS config name (e.g. 'english', 'pt_br'). Validated by getFtsLanguage()
// — safe to interpolate into raw SQL.
const ftsLang = getFtsLanguage();
const ftsQueryExpr = buildWebsearchQueryExpr(ftsLang, '$1', query);
const rawQuery = `
WITH ranked_chunks AS (
@@ -1771,11 +1768,11 @@ export class PostgresEngine implements BrainEngine {
p.slug, p.id as page_id, p.title, p.type, p.source_id,
p.effective_date, p.effective_date_source,
cc.id as chunk_id, cc.chunk_index, cc.chunk_text, cc.chunk_source,
ts_rank(cc.search_vector, ${ftsQueryExpr}) * ${sourceFactorCase} AS score
ts_rank(cc.search_vector, websearch_to_tsquery('${ftsLang}', $1)) * ${sourceFactorCase} AS score
FROM content_chunks cc
JOIN pages p ON p.id = cc.page_id
JOIN sources s ON s.id = p.source_id
WHERE cc.search_vector @@ ${ftsQueryExpr}
WHERE cc.search_vector @@ websearch_to_tsquery('${ftsLang}', $1)
${typeClause}
${typesClause}
${excludeSlugsClause}
@@ -1866,10 +1863,7 @@ export class PostgresEngine implements BrainEngine {
// FTS config name (e.g. 'english', 'pt_br'). Validated by getFtsLanguage()
// — safe to interpolate into raw SQL.
const ftsLang = getFtsLanguage();
const ftsQueryExpr = buildWebsearchQueryExpr(ftsLang, '$1', query);
// #2380: slash-bearing queries match both the split-word and literal
// slash forms — see buildWebsearchQueryExpr in ./search/sql-ranking.ts.
const params: unknown[] = [query];
let typeClause = '';
if (opts?.type) {
@@ -1929,7 +1923,7 @@ export class PostgresEngine implements BrainEngine {
COALESCE(rep.chunk_index, 0) as chunk_index,
COALESCE(rep.chunk_text, '') as chunk_text,
COALESCE(rep.chunk_source, 'compiled_truth') as chunk_source,
ts_rank_cd(p.search_vector, ${ftsQueryExpr}) * ${sourceFactorCase} AS score,
ts_rank_cd(p.search_vector, websearch_to_tsquery('${ftsLang}', $1)) * ${sourceFactorCase} AS score,
false AS stale
FROM pages p
JOIN sources s ON s.id = p.source_id
@@ -1942,7 +1936,7 @@ export class PostgresEngine implements BrainEngine {
ORDER BY (cc.chunk_source = 'compiled_truth') DESC, cc.chunk_index ASC
LIMIT 1
) rep ON true
WHERE p.search_vector @@ ${ftsQueryExpr}
WHERE p.search_vector @@ websearch_to_tsquery('${ftsLang}', $1)
${typeClause}
${typesClause}
${excludeSlugsClause}
@@ -2006,8 +2000,6 @@ export class PostgresEngine implements BrainEngine {
const hardExcludePrefixes = resolveHardExcludes(opts?.exclude_slug_prefixes, opts?.include_slug_prefixes);
const hardExcludeClause = buildHardExcludeClause('p.slug', hardExcludePrefixes);
// #2380: slash-bearing queries match both the split-word and literal
// slash forms — see buildWebsearchQueryExpr in ./search/sql-ranking.ts.
const params: unknown[] = [query];
let typeClause = '';
if (type) {
@@ -2068,19 +2060,18 @@ export class PostgresEngine implements BrainEngine {
// FTS config name (e.g. 'english', 'pt_br'). Validated by getFtsLanguage()
// — safe to interpolate into raw SQL.
const ftsLang = getFtsLanguage();
const ftsQueryExpr = buildWebsearchQueryExpr(ftsLang, '$1', query);
const rawQuery = `
SELECT
p.slug, p.id as page_id, p.title, p.type, p.source_id,
p.effective_date, p.effective_date_source,
cc.id as chunk_id, cc.chunk_index, cc.chunk_text, cc.chunk_source,
ts_rank(cc.search_vector, ${ftsQueryExpr}) * ${sourceFactorCase} AS score,
ts_rank(cc.search_vector, websearch_to_tsquery('${ftsLang}', $1)) * ${sourceFactorCase} AS score,
false AS stale
FROM content_chunks cc
JOIN pages p ON p.id = cc.page_id
JOIN sources s ON s.id = p.source_id
WHERE cc.search_vector @@ ${ftsQueryExpr}
WHERE cc.search_vector @@ websearch_to_tsquery('${ftsLang}', $1)
${typeClause}
${typesClause}
${excludeSlugsClause}
+25
View File
@@ -8,6 +8,7 @@
import type { BrainEngine } from '../engine.ts';
import type { RecommendationContext } from '../brain-score-recommendations.ts';
import { LINK_EXTRACTOR_VERSION_TS } from '../link-extraction.ts';
// Re-export so consumers can `import { RecommendationContext } from '../remediation'`
// — the canonical RecommendationContext type still lives in
@@ -68,5 +69,29 @@ export async function loadRecommendationContext(
embeddingDimensions,
embeddingProviderConfigured: embeddingConfigured,
hasChatApiKey: !!(process.env.ANTHROPIC_API_KEY || fileCfg?.anthropic_api_key),
extractionLagPages: await countExtractionLag(engine),
};
}
/**
* Real extraction-lag count — the SAME staleness `gbrain extract --stale`
* processes (engine.countStalePagesForExtraction with
* versionTs=LINK_EXTRACTOR_VERSION_TS, matching doctor's links_extraction_lag
* check — without versionTs, pages stamped before an extractor version bump
* would lag for doctor/extract but never trip this gate). Drives the
* sync→extract recommendation pipeline; replaces the legacy
* `health.stale_pages` proxy that no longer reflected real extraction work
* after the v10 trigger drop.
*
* Shared by loadRecommendationContext AND the D7 per-step recheck in
* runRemediation — the recheck MUST refresh this gate alongside getHealth,
* or a completed extract step keeps re-firing off the frozen initial count.
*/
export async function countExtractionLag(engine: BrainEngine): Promise<number> {
try {
return await engine.countStalePagesForExtraction({ versionTs: LINK_EXTRACTOR_VERSION_TS });
} catch {
/* counter unavailable (very old brain / mid-migration) — treat as 0 */
return 0;
}
}
+7 -2
View File
@@ -16,7 +16,7 @@ import {
computeRecommendations,
} from '../brain-score-recommendations.ts';
import type { RemediationStep } from '../remediation-step.ts';
import { loadRecommendationContext } from './context.ts';
import { countExtractionLag, loadRecommendationContext } from './context.ts';
import { computeRemediationPlan } from './plan.ts';
import type {
RemediationHooks,
@@ -65,7 +65,7 @@ export async function runRemediation(
clearRemediationCheckpoint,
} = await import('../remediation-checkpoint.ts');
const ctx = await loadRecommendationContext(engine);
let ctx = await loadRecommendationContext(engine);
// Pre-flight ceiling check via the shared plan computation.
const initialPlan = await computeRemediationPlan(engine, { targetScore });
@@ -305,6 +305,11 @@ export async function runRemediation(
// steps with bumped retry suffix (D1).
if (recs.length === 0 || stepCount >= maxJobs) break;
const freshHealth = await engine.getHealth();
// Refresh the extraction-lag gate alongside health: ctx was loaded once
// before the loop, and a completed sync/extract step is exactly what
// drives the count down. Reusing the frozen initial count would re-fire
// sync.repo/extract.all every recheck until maxJobs.
ctx = { ...ctx, extractionLagPages: await countExtractionLag(engine) };
recs = computeRecommendations(freshHealth, ctx).filter((r) => r.status === 'remediable');
}
};
-22
View File
@@ -251,28 +251,6 @@ export function buildOrFallbackWebsearchQuery(query: string): string | null {
return tokens.join(' OR ');
}
/**
* #2380: FTS query expression for slash-bearing queries. Postgres' default
* text-search parser classifies `foo/bar` as a single `file`-alias lexeme —
* on BOTH the query side and the index side. So a raw `foo/bar` query only
* matched documents carrying the identical joined lexeme (literal paths),
* and a slash-split query only matches documents whose text had the words
* separated. Neither form alone covers both document shapes; OR the two
* parses so a slash query matches prose ("foo and bar", stemmed, AND
* semantics) AND literal slash forms ("src/core/x.ts") alike.
*
* Slash-free queries return the plain single-parse expression — byte-
* identical SQL and identical ts_rank to the historical behavior.
*
* `ftsLang` is validated by getFtsLanguage() (safe to interpolate);
* `param` is a `$N` placeholder, never user text.
*/
export function buildWebsearchQueryExpr(ftsLang: string, param: string, query: string): string {
const plain = `websearch_to_tsquery('${ftsLang}', ${param})`;
if (!query.includes('/')) return plain;
return `(websearch_to_tsquery('${ftsLang}', translate(${param}, '/', ' ')) || ${plain})`;
}
// ============================================================
// v0.29.1 — Recency component SQL builder
// ============================================================
+9
View File
@@ -1423,6 +1423,15 @@ export interface BrainStats {
export interface BrainHealth {
page_count: number;
embed_coverage: number;
/**
* LEGACY proxy: count of pages whose `updated_at` predates their newest
* timeline entry. This bumped meaningfully only while a trigger updated
* `pages.updated_at` on timeline insert; that trigger was dropped in
* migration v10, so the metric no longer reflects real "needs work" state.
* NO LONGER gates remediations — the sync→extract pipeline now gates on
* `RecommendationContext.extractionLagPages` (the real extraction-lag from
* `countStalePagesForExtraction`). Retained for the CLI health line + back-compat.
*/
stale_pages: number;
/**
* Islanded pages — zero inbound AND zero outbound links. A hub page
@@ -28,8 +28,8 @@ describe('v0.32 #779: no_batch_cap suppresses the missing-max_batch_tokens warni
resetGateway();
});
test('LiteLLM and llama-server declare no_batch_cap: true', () => {
for (const id of ['litellm', 'llama-server']) {
test('Ollama, LiteLLM, llama-server all declare no_batch_cap: true', () => {
for (const id of ['ollama', 'litellm', 'llama-server']) {
const r = getRecipe(id);
expect(r, `${id} not registered`).toBeDefined();
expect(
@@ -39,18 +39,6 @@ describe('v0.32 #779: no_batch_cap suppresses the missing-max_batch_tokens warni
}
});
test('#2552: Ollama declares a conservative static batch cap, not no_batch_cap', () => {
// A CPU-only Ollama box wedges when a whole page ships in one request;
// Ollama never returns a token-limit error so the recursive-halving
// safety net can't fire. The pre-split cap is the only guard.
const r = getRecipe('ollama');
expect(r).toBeDefined();
const e = r!.touchpoints.embedding!;
expect(e.no_batch_cap).toBeUndefined();
expect(e.max_batch_tokens).toBe(4096);
expect(e.chars_per_token).toBe(2);
});
test('configureGateway does NOT warn for ollama/litellm/llama-server', () => {
warnSpy.mockClear();
resetGateway();
+9 -12
View File
@@ -119,13 +119,12 @@ describe('computeRecommendations', () => {
expect(recs.find((r) => r.id === 'embed.stale')).toBeUndefined();
});
test('stale pages + dead links produce sync + backlinks + extract', () => {
test('extraction lag + dead links produce sync + backlinks + extract', () => {
const health = makeHealth({
stale_pages: 25,
dead_links: 8,
brain_score: 70,
});
const recs = computeRecommendations(health, { repoPath: '/brain', embeddingProviderConfigured: true });
const recs = computeRecommendations(health, { repoPath: '/brain', embeddingProviderConfigured: true, extractionLagPages: 25 });
const ids = recs.map((r) => r.id);
expect(ids).toContain('sync.repo');
expect(ids).toContain('backlinks.fix');
@@ -133,18 +132,17 @@ describe('computeRecommendations', () => {
});
test('extract.all depends on sync.repo (D14: stable ids)', () => {
const health = makeHealth({ stale_pages: 10 });
const recs = computeRecommendations(health, { repoPath: '/brain', embeddingProviderConfigured: true });
const health = makeHealth();
const recs = computeRecommendations(health, { repoPath: '/brain', embeddingProviderConfigured: true, extractionLagPages: 10 });
const extract = recs.find((r) => r.id === 'extract.all');
expect(extract?.depends_on).toContain('sync.repo');
});
test('embed.stale depends on sync.repo when sync also needed', () => {
test('embed.stale depends on sync.repo when extraction also needed', () => {
const health = makeHealth({
stale_pages: 10,
missing_embeddings: 100,
});
const recs = computeRecommendations(health, { repoPath: '/brain', embeddingProviderConfigured: true });
const recs = computeRecommendations(health, { repoPath: '/brain', embeddingProviderConfigured: true, extractionLagPages: 10 });
const embed = recs.find((r) => r.id === 'embed.stale');
expect(embed?.depends_on).toContain('sync.repo');
});
@@ -159,9 +157,9 @@ describe('computeRecommendations', () => {
test('severity ordering: critical before high before medium', () => {
const health = makeHealth({
missing_embeddings: 100, // critical
stale_pages: 80, // high
});
const recs = computeRecommendations(health, { repoPath: '/brain', embeddingProviderConfigured: true });
// extractionLagPages > 50 → sync.repo fires at 'high' severity.
const recs = computeRecommendations(health, { repoPath: '/brain', embeddingProviderConfigured: true, extractionLagPages: 80 });
const critIdx = recs.findIndex((r) => r.severity === 'critical');
const highIdx = recs.findIndex((r) => r.severity === 'high');
expect(critIdx).toBeLessThan(highIdx);
@@ -170,11 +168,10 @@ describe('computeRecommendations', () => {
// D6 #5 — THE critical regression test for the agent contract.
test('D6 #5: determinism — same input twice produces identical output', () => {
const health = makeHealth({
stale_pages: 10,
missing_embeddings: 50,
dead_links: 3,
});
const ctx = { repoPath: '/brain', embeddingProviderConfigured: true, sourceId: 'default' };
const ctx = { repoPath: '/brain', embeddingProviderConfigured: true, sourceId: 'default', extractionLagPages: 10 };
const run1 = computeRecommendations(health, ctx);
const run2 = computeRecommendations(health, ctx);
expect(JSON.stringify(run1)).toBe(JSON.stringify(run2));
-118
View File
@@ -1,118 +0,0 @@
/**
* #2552: cloud-tuned embedding defaults silently wedge CPU-only local
* endpoints (Ollama). Three-part fix under test:
*
* 1. `isLocalEmbeddingEndpoint()` gateway helper detecting local
* inference servers (ollama / llama-server recipes, localhost base URL).
* 2. `resolveEmbedConcurrency()` embed auto-caps the 20-worker fan-out
* at LOCAL_EMBED_CONCURRENCY_CAP for local endpoints unless the
* operator set GBRAIN_EMBED_CONCURRENCY explicitly.
* 3. `computeEmbedConcurrencyCheck()` doctor warns when an explicit env
* override fans out against a local endpoint.
*
* Serial: mutates process.env and the module-global gateway config.
*/
import { afterAll, afterEach, describe, expect, test } from 'bun:test';
import {
configureGateway,
resetGateway,
isLocalEmbeddingEndpoint,
LOCAL_EMBED_CONCURRENCY_CAP,
} from '../src/core/ai/gateway.ts';
import { resolveEmbedConcurrency } from '../src/commands/embed.ts';
import { computeEmbedConcurrencyCheck } from '../src/commands/doctor.ts';
const SAVED_ENV = process.env.GBRAIN_EMBED_CONCURRENCY;
afterEach(() => {
resetGateway();
if (SAVED_ENV === undefined) delete process.env.GBRAIN_EMBED_CONCURRENCY;
else process.env.GBRAIN_EMBED_CONCURRENCY = SAVED_ENV;
});
afterAll(() => {
resetGateway();
});
describe('#2552 isLocalEmbeddingEndpoint', () => {
test('false when the gateway is not configured (fail-open to cloud behavior)', () => {
resetGateway();
expect(isLocalEmbeddingEndpoint()).toBe(false);
});
test('true for the ollama recipe', () => {
configureGateway({ embedding_model: 'ollama:nomic-embed-text', env: {} });
expect(isLocalEmbeddingEndpoint()).toBe(true);
});
test('true for the llama-server recipe', () => {
configureGateway({ embedding_model: 'llama-server:my-gguf', env: {} });
expect(isLocalEmbeddingEndpoint()).toBe(true);
});
test('false for a cloud recipe', () => {
configureGateway({
embedding_model: 'openai:text-embedding-3-small',
env: { OPENAI_API_KEY: 'fake' },
});
expect(isLocalEmbeddingEndpoint()).toBe(false);
});
test('true when a cloud recipe base URL is explicitly pointed at localhost', () => {
configureGateway({
embedding_model: 'openai:text-embedding-3-small',
env: { OPENAI_API_KEY: 'fake' },
base_urls: { openai: 'http://localhost:8080/v1' },
});
expect(isLocalEmbeddingEndpoint()).toBe(true);
});
});
describe('#2552 resolveEmbedConcurrency', () => {
test('caps at LOCAL_EMBED_CONCURRENCY_CAP for a local endpoint when env is unset', () => {
delete process.env.GBRAIN_EMBED_CONCURRENCY;
configureGateway({ embedding_model: 'ollama:nomic-embed-text', env: {} });
expect(resolveEmbedConcurrency()).toBe(LOCAL_EMBED_CONCURRENCY_CAP);
});
test('explicit env override always wins, even against a local endpoint', () => {
process.env.GBRAIN_EMBED_CONCURRENCY = '10';
configureGateway({ embedding_model: 'ollama:nomic-embed-text', env: {} });
expect(resolveEmbedConcurrency()).toBe(10);
});
test('cloud endpoints keep the historical default of 20', () => {
delete process.env.GBRAIN_EMBED_CONCURRENCY;
configureGateway({ env: { OPENAI_API_KEY: 'fake' } });
expect(resolveEmbedConcurrency()).toBe(20);
});
test('pacing only ever lowers concurrency', () => {
delete process.env.GBRAIN_EMBED_CONCURRENCY;
configureGateway({ embedding_model: 'ollama:nomic-embed-text', env: {} });
expect(resolveEmbedConcurrency(1)).toBe(1);
expect(resolveEmbedConcurrency(16)).toBe(LOCAL_EMBED_CONCURRENCY_CAP);
});
});
describe('#2552 computeEmbedConcurrencyCheck (doctor)', () => {
test('ok for non-local endpoints', () => {
expect(computeEmbedConcurrencyCheck(false, '20', 2).status).toBe('ok');
});
test('warn when an explicit override exceeds the local cap', () => {
const check = computeEmbedConcurrencyCheck(true, '20', 2);
expect(check.status).toBe('warn');
expect(check.message).toContain('GBRAIN_EMBED_CONCURRENCY=20');
});
test('ok when env is unset against a local endpoint (auto-cap applies)', () => {
expect(computeEmbedConcurrencyCheck(true, undefined, 2).status).toBe('ok');
});
test('ok when the override is at or under the cap', () => {
expect(computeEmbedConcurrencyCheck(true, '2', 2).status).toBe('ok');
expect(computeEmbedConcurrencyCheck(true, '1', 2).status).toBe('ok');
});
});
-61
View File
@@ -216,67 +216,6 @@ describe('PGLiteEngine: Search', () => {
expect(results.length).toBe(0);
});
// Regression (#2380): queries containing `/` used to bypass FTS AND
// semantics. Postgres' default text-search parser classifies `foo/bar` as
// a `file`-alias token mapped to the `simple` dictionary, so it became a
// single un-stemmed lexeme `'foo/bar'` that never matches indexed text —
// the primary FTS pass returned 0 and the OR fallback took over, matching
// pages that contain EITHER term. searchKeyword/searchTitles now normalize
// `/` to whitespace before websearch_to_tsquery parses, so the primary
// AND pass matches directly.
test('searchKeyword: slash query matches with AND semantics, not OR fallback', async () => {
// Decoy shares only ONE of the two query terms ('enterprise').
await engine.putPage('concepts/enterprise-pricing', {
type: 'concept', title: 'Widget Pricing',
compiled_truth: 'Enterprise pricing for widgets.',
});
await engine.upsertChunks('concepts/enterprise-pricing', [
{ chunk_index: 0, chunk_text: 'Enterprise pricing for widgets', chunk_source: 'compiled_truth' },
]);
// Both terms co-occur only in the novamind chunk. Pre-fix this returned
// BOTH pages (primary pass zero-hit → OR fallback); post-fix the primary
// AND pass returns exactly the co-occurrence page.
const results = await engine.searchKeyword('NovaMind/enterprise');
expect(results.length).toBe(1);
expect(results[0].slug).toBe('companies/novamind');
});
test('searchTitles: slash query matches with AND semantics, not OR fallback', async () => {
await engine.putPage('companies/novamind-enterprise', {
type: 'company', title: 'NovaMind Enterprise Platform',
compiled_truth: 'Placeholder body.',
});
await engine.putPage('guides/enterprise-sales', {
type: 'concept', title: 'Enterprise Sales Guide',
compiled_truth: 'Placeholder body.',
});
// Pre-fix: `NovaMind/Enterprise` parsed as one file-alias lexeme → the
// primary title pass returned 0 and the OR fallback matched BOTH titles.
const results = await engine.searchTitles('NovaMind/Enterprise');
expect(results.length).toBe(1);
expect(results[0].slug).toBe('companies/novamind-enterprise');
});
test('searchKeyword: slash query still matches the literal slash form (file paths)', async () => {
// The INDEX side also emits the joined file-alias lexeme for literal
// `foo/bar` text, so a query normalized to split words alone would go
// blind to documents containing the literal slash form (paths, URLs).
// buildWebsearchQueryExpr ORs both parses; this pins the raw arm.
await engine.putPage('runbooks/widget-deploy', {
type: 'concept', title: 'Widget Deploy Runbook',
compiled_truth: 'Runbook for the acme/widget deployment pipeline.',
});
await engine.upsertChunks('runbooks/widget-deploy', [
{ chunk_index: 0, chunk_text: 'Runbook for the acme/widget deployment pipeline', chunk_source: 'compiled_truth' },
]);
const results = await engine.searchKeyword('acme/widget');
expect(results.length).toBe(1);
expect(results[0].slug).toBe('runbooks/widget-deploy');
});
test('tsvector trigger populates search_vector on insert', async () => {
// Verify the PL/pgSQL trigger fires and content_chunks.search_vector is
// populated from chunk_text. v0.20.0 Cathedral II Layer 3 moved FTS from
@@ -0,0 +1,62 @@
// test/remediation-context-extraction-lag.test.ts
//
// Pins the v-next fix: the sync→extract remediation pipeline gates on REAL
// extraction lag, not the legacy `health.stale_pages` proxy (which counted
// "updated_at predates newest timeline entry" — meaningless after the v10
// trigger drop). loadRecommendationContext now populates `extractionLagPages`
// from `engine.countStalePagesForExtraction` — the SAME counter the
// `gbrain extract --stale` walk and doctor's `links_extraction_lag` use — so a
// recommendation can only fire when running extract will actually reduce it.
import { afterAll, beforeAll, describe, expect, it } from 'bun:test';
import { PGLiteEngine } from '../src/core/pglite-engine.ts';
import { loadRecommendationContext } from '../src/core/remediation/context.ts';
let engine: PGLiteEngine;
beforeAll(async () => {
engine = new PGLiteEngine();
await engine.connect({});
await engine.initSchema();
});
afterAll(async () => {
await engine.disconnect();
});
describe('loadRecommendationContext — extractionLagPages wiring', () => {
it('is 0 on an empty brain (nothing to extract)', async () => {
const ctx = await loadRecommendationContext(engine);
expect(ctx.extractionLagPages).toBe(0);
});
it('reflects the real extraction-lag count once a page needs extraction', async () => {
// A freshly-imported page has links_extracted_at = NULL, which the canonical
// countStalePagesForExtraction predicate counts as stale-for-extraction.
await engine.putPage('p0', {
title: 'p0',
type: 'note' as never,
compiled_truth: 'body that is long enough to pass any minimum-length guards in the codebase',
timeline: '',
frontmatter: {},
source_path: 'p0.md',
});
const ctx = await loadRecommendationContext(engine);
expect(ctx.extractionLagPages).toBeGreaterThan(0);
});
it('counts pages stamped before LINK_EXTRACTOR_VERSION_TS (version-bump arm)', async () => {
// Backdate p0 so BOTH the NULL arm and the updated_at arm are quiet:
// updated_at < links_extracted_at, but links_extracted_at predates the
// extractor version stamp. doctor's links_extraction_lag and
// `extract --stale` both count this page; the remediation gate must too.
await engine.executeRaw(
`UPDATE pages SET updated_at = '2020-01-01T00:00:00Z'::timestamptz,
links_extracted_at = '2020-01-02T00:00:00Z'::timestamptz
WHERE slug = 'p0'`,
[],
);
const ctx = await loadRecommendationContext(engine);
expect(ctx.extractionLagPages).toBeGreaterThan(0);
});
});
@@ -0,0 +1,81 @@
// test/remediation-run-d7-refresh.serial.test.ts
//
// Pins the D7-recheck half of the extraction-lag gate fix: runRemediation
// loads RecommendationContext ONCE before the step loop, and the per-step
// recheck (D7) must REFRESH ctx.extractionLagPages alongside getHealth.
// Without the refresh, a completed sync/extract step keeps re-firing off
// the frozen initial count — the plan never converges and the loop burns
// steps until maxJobs.
//
// SERIAL (R2): uses top-level mock.module for the minion queue +
// wait-for-completion so no real worker is needed — mocks leak across
// files in a shard process, so this file must run in its own process.
import { describe, expect, mock, test } from 'bun:test';
// The fake brain: sync.repo clears the extraction lag when it "runs"
// (today's sync materializes link/timeline edges; extract.all is the
// explicit re-materializer). The frozen-ctx bug makes runRemediation
// ignore that and resubmit sync.repo on every D7 recheck.
let extractionLag = 25;
const submittedJobs: string[] = [];
mock.module('../src/core/minions/queue.ts', () => ({
MinionQueue: class {
constructor(_engine: unknown) {}
async add(job: string): Promise<{ id: number }> {
submittedJobs.push(job);
if (job === 'sync' || job === 'extract') extractionLag = 0;
return { id: submittedJobs.length };
}
},
}));
mock.module('../src/core/minions/wait-for-completion.ts', () => ({
waitForCompletion: async () => ({ status: 'completed' }),
}));
const health = () => ({
page_count: 100,
embed_coverage: 1.0,
stale_pages: 0, // legacy proxy stays 0 — the real counter drives the gate
orphan_pages: 0,
missing_embeddings: 0,
brain_score: 70,
dead_links: 0,
link_coverage: 1.0,
timeline_coverage: 1.0,
most_connected: [],
embed_coverage_score: 35,
link_density_score: 25,
timeline_coverage_score: 15,
no_orphans_score: 15,
no_dead_links_score: 10,
});
const fakeEngine = {
kind: 'pglite' as const,
getHealth: async () => health(),
getConfig: async (key: string) =>
key === 'sync.repo_path' ? '/tmp/brain-example' : null,
countStalePagesForExtraction: async () => extractionLag,
};
describe('runRemediation D7 recheck — extraction-lag gate refresh', () => {
test('a completed materializer step clears the gate; the pipeline is not resubmitted', async () => {
const { runRemediation } = await import('../src/core/remediation/run.ts');
const result = await runRemediation(
// Only the methods the orchestrator touches are needed.
fakeEngine as never,
{ targetScore: 0, maxJobs: 6 },
);
// Frozen-ctx bug: extractionLagPages stays 25 forever, so every D7
// recheck re-introduces the sync/extract pipeline and the loop burns
// all 6 maxJobs. With the refresh, the plan converges after the first
// completed step: no step id is ever submitted twice.
const ids = result.submitted.map((s) => s.id);
expect(new Set(ids).size).toBe(ids.length);
expect(submittedJobs.length).toBeLessThan(3);
expect(extractionLag).toBe(0);
});
});