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https://github.com/garrytan/gbrain.git
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Compare commits
2
Commits
| Author | SHA1 | Date | |
|---|---|---|---|
|
|
3487e4b255 | ||
|
|
159ddc3249 |
@@ -19,7 +19,7 @@
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*/
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import type { BrainEngine } from '../core/engine.ts';
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import { resolveCalibrationHolder, runPhaseCalibrationProfile } from '../core/cycle/calibration-profile.ts';
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import { runPhaseCalibrationProfile } from '../core/cycle/calibration-profile.ts';
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import { sourceScopeOpts, type OperationContext } from '../core/operations.ts';
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import type { GBrainConfig } from '../core/config.ts';
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import { GBrainError } from '../core/types.ts';
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@@ -167,7 +167,7 @@ export async function runCalibration(
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config: GBrainConfig,
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): Promise<void> {
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const { opts } = parseArgs(args);
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const holder = await resolveCalibrationHolder(engine, opts.holder);
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const holder = opts.holder ?? 'garry';
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// Resolve --source / GBRAIN_SOURCE / .gbrain-source so the (now reachable, #2035)
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// calibration command targets the right source in a multi-source brain instead
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// of always reading `default`. No signal → 'default' (prior behavior).
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@@ -253,14 +253,14 @@ export async function getCalibrationProfileOp(
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ctx: OperationContext,
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params: { holder?: string },
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): Promise<CalibrationProfileRow | null> {
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if (params.holder !== undefined && (typeof params.holder !== 'string' || params.holder.length === 0)) {
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const holder = params.holder ?? 'garry';
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if (typeof holder !== 'string' || holder.length === 0) {
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throw new GBrainError(
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'INVALID_HOLDER',
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'get_calibration_profile.holder must be a non-empty string',
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'pass holder="<slug>" or omit to default to the calibration.user_holder config (then "garry")',
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'pass holder="<slug>" or omit to default to "garry"',
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);
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}
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const holder = await resolveCalibrationHolder(ctx.engine, params.holder);
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const scope = sourceScopeOpts(ctx);
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return getLatestProfile(ctx.engine, { holder, ...scope });
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}
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+43
-13
@@ -1,6 +1,7 @@
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import type { BrainEngine } from '../core/engine.ts';
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import { embedBatch, currentEmbeddingSignature } from '../core/embedding.ts';
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import type { ChunkInput } from '../core/types.ts';
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import type { ChunkInput, ResolvedColumn } from '../core/types.ts';
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import { resolveWriteColumnForEngine } from '../core/search/embedding-column.ts';
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import { chunkText } from '../core/chunkers/recursive.ts';
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import { createProgress, type ProgressReporter } from '../core/progress.ts';
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import { getCliOptions, cliOptsToProgressOptions } from '../core/cli-options.ts';
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@@ -183,8 +184,13 @@ export class EmbeddingDimMismatchError extends Error {
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* fresh-install bug class at the very first invocation instead of letting
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* the worker pool hammer N pages with raw 22000 errors.
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*/
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async function preflightDimMismatch(engine: BrainEngine, dryRun: boolean): Promise<void> {
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async function preflightDimMismatch(engine: BrainEngine, dryRun: boolean, embeddingColumn?: ResolvedColumn): Promise<void> {
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if (dryRun) return; // dry-run never embeds, no risk
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// #1262: an alt-column brain writes to `embeddingColumn`, not the legacy
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// `embedding` column — the legacy column's dims are irrelevant, and the
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// registry entry (validated at resolve time) pins the target's dims. Only
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// the legacy default path needs the schema-vs-gateway dim comparison.
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if (embeddingColumn && embeddingColumn.name !== 'embedding') return;
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const { readContentChunksEmbeddingDim, embeddingMismatchMessage } = await import('../core/embedding-dim-check.ts');
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const { getEmbeddingDimensions, getEmbeddingModel } = await import('../core/ai/gateway.ts');
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let existing;
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@@ -238,7 +244,12 @@ export async function runEmbedCore(engine: BrainEngine, opts: EmbedOpts): Promis
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// v0.37.11.0 (Lane D.2): pre-flight dim-mismatch check. Catches the headline
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// fresh-install bug class before the worker pool spends 20 parallel calls
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// hitting raw Postgres dimension errors.
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await preflightDimMismatch(engine, !!opts.dryRun);
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// #1262: resolve the write-side embedding column ONCE at the boundary
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// (merged config + gateway model) and thread the descriptor through every
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// upsertChunks / stale-scan below. undefined => legacy `embedding` column.
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const embeddingColumn = await resolveWriteColumnForEngine(engine);
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await preflightDimMismatch(engine, !!opts.dryRun, embeddingColumn);
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const result: EmbedResult = {
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embedded: 0,
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@@ -253,7 +264,7 @@ export async function runEmbedCore(engine: BrainEngine, opts: EmbedOpts): Promis
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for (const s of opts.slugs) {
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if (isAborted(opts.signal)) break; // #1737: stop the per-slug loop on abort
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try {
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await embedPage(engine, s, !!opts.dryRun, result, opts.sourceId, opts.signal);
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await embedPage(engine, s, !!opts.dryRun, result, opts.sourceId, opts.signal, embeddingColumn);
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} catch (e: unknown) {
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serr(` Error embedding ${s}: ${e instanceof Error ? e.message : e}`);
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}
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@@ -347,7 +358,7 @@ export async function runEmbedCore(engine: BrainEngine, opts: EmbedOpts): Promis
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catchUp: opts.catchUp,
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pacer,
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paceMaxConcurrency,
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}, opts.signal);
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}, opts.signal, embeddingColumn);
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} finally {
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// E1: surface pacing telemetry (human + structured) when pacing was on.
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const snap = pacer.snapshot();
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@@ -376,7 +387,7 @@ export async function runEmbedCore(engine: BrainEngine, opts: EmbedOpts): Promis
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return result;
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}
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if (opts.slug) {
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await embedPage(engine, opts.slug, !!opts.dryRun, result, opts.sourceId, opts.signal);
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await embedPage(engine, opts.slug, !!opts.dryRun, result, opts.sourceId, opts.signal, embeddingColumn);
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return result;
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}
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throw new Error('No embed target specified. Pass { slug }, { slugs }, { all }, or { stale }.');
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@@ -521,8 +532,13 @@ async function embedPage(
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result: EmbedResult,
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sourceId?: string,
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signal?: AbortSignal,
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embeddingColumn?: ResolvedColumn,
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) {
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const opts = sourceId ? { sourceId } : undefined;
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// #1262: write-side descriptor rides only on WRITE calls (upsertChunks).
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const chunkOpts = (sourceId || embeddingColumn)
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? { ...(sourceId && { sourceId }), ...(embeddingColumn && { embeddingColumn }) }
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: undefined;
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const page = await engine.getPage(slug, opts);
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if (!page) {
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throw new Error(`Page not found: ${slug}`);
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@@ -554,7 +570,7 @@ async function embedPage(
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}
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if (inputs.length > 0) {
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await engine.upsertChunks(slug, inputs, opts);
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await engine.upsertChunks(slug, inputs, chunkOpts);
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chunks = await engine.getChunks(slug, opts);
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}
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}
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@@ -589,7 +605,7 @@ async function embedPage(
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token_count: c.token_count || Math.ceil(c.chunk_text.length / 4),
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}));
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await engine.upsertChunks(slug, updated, opts);
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await engine.upsertChunks(slug, updated, chunkOpts);
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// v0.41.31: stamp provenance so a later model/dims swap is detectable as
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// stale. embedPage is the per-slug path used by `gbrain embed <slug>` AND
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// by `gbrain sync`'s post-import embed step (runEmbedCore({slugs})).
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@@ -622,6 +638,7 @@ async function embedAll(
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paceMaxConcurrency?: number;
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},
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signal?: AbortSignal,
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embeddingColumn?: ResolvedColumn,
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) {
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// v0.41.31: current embedding provenance signature. Stamped onto pages
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// when their chunks are (re)embedded so a later model/dimension swap is
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@@ -644,7 +661,7 @@ async function embedAll(
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// D7: thread sourceId so `gbrain embed --stale --source X` actually scopes.
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// v0.41.18.0 (A13): thread batchSize/priority/catchUp into the stale path.
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// #1737: thread the external abort signal so the cycle embed phase bails.
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return await embedAllStale(engine, sourceId, dryRun, result, onProgress, staleOpts, signature, signal);
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return await embedAllStale(engine, sourceId, dryRun, result, onProgress, staleOpts, signature, signal, embeddingColumn);
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}
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// --all path: pacer (no-op when off). E-1: lower the worker count to the
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@@ -725,7 +742,10 @@ async function embedAll(
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embedding: embeddingMap.get(c.chunk_index) ?? undefined,
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token_count: c.token_count || Math.ceil(c.chunk_text.length / 4),
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}));
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await observed(pacer, () => engine.upsertChunks(page.slug, updated, pageOpts));
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await observed(pacer, () => engine.upsertChunks(page.slug, updated, {
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...(pageSourceId && { sourceId: pageSourceId }),
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...(embeddingColumn && { embeddingColumn }),
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}));
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// v0.41.31: stamp embedding provenance so a later model swap is
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// detectable as stale.
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await observed(pacer, () =>
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@@ -805,10 +825,16 @@ async function embedAllStale(
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},
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signature?: string,
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externalSignal?: AbortSignal,
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embeddingColumn?: ResolvedColumn,
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) {
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// D7: thread sourceId so source-scoped runs only count + visit
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// that source's NULL embeddings.
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const sourceOpt = sourceId ? { sourceId } : undefined;
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// #1262: the stale predicate follows the write-side column — without it an
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// alt-column brain would perpetually re-select (and re-pay for) chunks whose
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// target column is already populated.
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const sourceOpt = (sourceId || embeddingColumn)
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? { ...(sourceId && { sourceId }), ...(embeddingColumn && { embeddingColumn }) }
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: undefined;
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// v0.41.31: re-embed pages whose embedding_signature drifted (model/dims
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// swap). dry-run must NOT mutate, so it counts signature-stale via the
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@@ -967,6 +993,7 @@ async function embedAllStale(
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afterUpdatedAt,
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}),
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...(sourceId && { sourceId }),
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...(embeddingColumn && { embeddingColumn }),
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}),
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);
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if (batch.length === 0) {
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@@ -1019,7 +1046,10 @@ async function embedAllStale(
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embedding: staleIdxToEmbedding.get(c.chunk_index) ?? undefined,
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token_count: c.token_count || Math.ceil(c.chunk_text.length / 4),
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}));
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await observed(pacer, () => engine.upsertChunks(slug, merged, { sourceId: keySourceId }));
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await observed(pacer, () => engine.upsertChunks(slug, merged, {
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sourceId: keySourceId,
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...(embeddingColumn && { embeddingColumn }),
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}));
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// v0.41.31: stamp provenance after the page's chunks are embedded —
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// but only when EVERY chunk was stale (fully re-embedded this pass).
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// A partially-stale page keeps preserved chunks of unknown/old
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@@ -1090,7 +1120,7 @@ async function embedAllStale(
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// as a clean run — re-running won't help until the underlying failure is fixed.
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if (staleOpts?.catchUp && !effectiveSignal.aborted && embedFailures > 0) {
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const remaining = await engine.countStaleChunks(
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signature ? { signature, ...(sourceId ? { sourceId } : {}) } : (sourceId ? { sourceId } : undefined),
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signature ? { signature, ...sourceOpt } : sourceOpt,
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);
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if (remaining > 0) {
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serr(`\n [embed] catch-up finished but ${remaining} chunk(s) remain stale after ${embedFailures} embed failure(s). These are not embeddable as-is; re-running won't clear them until the underlying error is resolved.`);
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@@ -576,9 +576,16 @@ async function runInlineCostGate(
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// Stale backlog: cheap single SQL; fail-open to 0 so a transient DB hiccup
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// never blocks the sync. Signature-aware (model/dims swap surfaces here).
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// #1262: follow the write-side embedding column — otherwise an alt-column
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// brain's fully-embedded corpus counts as phantom backlog on every gate.
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let staleChars = 0;
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try {
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staleChars = await engine.sumStaleChunkChars({ signature: currentEmbeddingSignature() });
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const { resolveWriteColumnForEngine } = await import('../core/search/embedding-column.ts');
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const embeddingColumn = await resolveWriteColumnForEngine(engine);
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staleChars = await engine.sumStaleChunkChars({
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signature: currentEmbeddingSignature(),
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...(embeddingColumn && { embeddingColumn }),
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});
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} catch {
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staleChars = 0;
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}
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|
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@@ -928,10 +928,6 @@ export const KNOWN_CONFIG_KEYS: readonly string[] = [
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// Emotional weight (v0.29)
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'emotional_weight.high_tags',
|
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'emotional_weight.user_holder',
|
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// Calibration holder (#1726): persistent default for the nightly
|
||||
// calibration_profile phase + `gbrain calibration`, symmetric with
|
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// emotional_weight.user_holder. Falls back to 'garry' when unset.
|
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'calibration.user_holder',
|
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// Cycle phase config
|
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'cycle.grade_takes.write_gstack_learnings',
|
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// Content sanity (v0.41)
|
||||
|
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@@ -61,6 +61,7 @@ import {
|
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type SynopsisFailureKind,
|
||||
} from './audit-synopsis.ts';
|
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import type { BrainEngine } from './engine.ts';
|
||||
import { resolveWriteColumnForEngine } from './search/embedding-column.ts';
|
||||
import type { ChunkInput, CRMode, Page } from './types.ts';
|
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import type { SourceRow } from './sources-ops.ts';
|
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|
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@@ -286,9 +287,13 @@ export async function reembedPageWithContextualRetrieval(
|
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|
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// ── PHASE 2: single DB transaction ───────────────────────────
|
||||
try {
|
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// #1262: contextual re-embeds write TEXT embeddings — thread the
|
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// caller-resolved write column like every other embed path.
|
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const embeddingColumn = await resolveWriteColumnForEngine(args.engine);
|
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await args.engine.transaction(async (tx) => {
|
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await tx.upsertChunks(args.pageSlug, phase1.embeddedChunks, {
|
||||
sourceId: args.sourceId,
|
||||
...(embeddingColumn && { embeddingColumn }),
|
||||
});
|
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await tx.updatePageContextualRetrievalState(
|
||||
args.pageSlug,
|
||||
|
||||
@@ -96,7 +96,7 @@ export type PatternStatementsGenerator = (input: {
|
||||
export type BiasTagsGenerator = (patterns: string[]) => Promise<string[]>;
|
||||
|
||||
export interface CalibrationProfileOpts extends BasePhaseOpts {
|
||||
/** Holder to generate the profile for. Default: `calibration.user_holder` config, then 'garry'. */
|
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/** Holder to generate the profile for. Default 'garry'. */
|
||||
holder?: string;
|
||||
/** Inject the patterns generator (tests). */
|
||||
patternsGenerator?: PatternStatementsGenerator;
|
||||
@@ -194,26 +194,6 @@ export function parseBiasTagsOutput(raw: string): string[] {
|
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.slice(0, 4);
|
||||
}
|
||||
|
||||
/**
|
||||
* #1726: resolve the calibration holder. Explicit param wins, then the
|
||||
* persistent `calibration.user_holder` config key (symmetric with
|
||||
* emotional_weight.user_holder), then the legacy 'garry' default. Fail-open:
|
||||
* a missing config table / mock engine without getConfig falls through.
|
||||
*/
|
||||
export async function resolveCalibrationHolder(
|
||||
engine: BrainEngine,
|
||||
explicit?: string,
|
||||
): Promise<string> {
|
||||
if (explicit) return explicit;
|
||||
try {
|
||||
const configured = await engine.getConfig('calibration.user_holder');
|
||||
if (configured && configured.trim().length > 0) return configured.trim();
|
||||
} catch {
|
||||
// Config unavailable — use the legacy default.
|
||||
}
|
||||
return 'garry';
|
||||
}
|
||||
|
||||
/** Pick the "loudest" pattern slot for the template fallback. */
|
||||
function pickFallbackSlots(scorecard: TakesScorecard): PatternStatementSlots {
|
||||
if (!scorecard || scorecard.resolved === 0) {
|
||||
@@ -247,7 +227,7 @@ class CalibrationProfilePhase extends BaseCyclePhase {
|
||||
_ctx: OperationContext,
|
||||
opts: CalibrationProfileOpts,
|
||||
): Promise<{ summary: string; details: Record<string, unknown>; status?: PhaseStatus }> {
|
||||
const holder = await resolveCalibrationHolder(engine, opts.holder);
|
||||
const holder = opts.holder ?? 'garry';
|
||||
const promptVersion = opts.promptVersion ?? CALIBRATION_PROFILE_PROMPT_VERSION;
|
||||
const modelId = opts.model ?? TIER_DEFAULTS.reasoning;
|
||||
const gradeCompletion = opts.gradeCompletion ?? 1.0;
|
||||
|
||||
+13
-2
@@ -18,7 +18,7 @@
|
||||
*/
|
||||
|
||||
import type { BrainEngine } from './engine.ts';
|
||||
import type { ChunkInput } from './types.ts';
|
||||
import type { ChunkInput, ResolvedColumn } from './types.ts';
|
||||
import { embedBatchWithBackoff } from '../commands/embed.ts';
|
||||
import { type DbPacer, createNoopPacer, observed } from './db-pacer.ts';
|
||||
import { AbortError } from './abort-check.ts';
|
||||
@@ -61,6 +61,13 @@ export interface EmbedStaleOpts {
|
||||
* Omit to keep the legacy `embedding IS NULL`-only behavior.
|
||||
*/
|
||||
embeddingSignature?: string;
|
||||
/**
|
||||
* #1262: caller-resolved write-side embedding column. Threaded into BOTH
|
||||
* listStaleChunks (staleness predicate) and upsertChunks (write target) so
|
||||
* an alt-column brain converges instead of re-selecting embedded rows.
|
||||
* Resolve at the boundary via `resolveWriteColumnForEngine()`.
|
||||
*/
|
||||
embeddingColumn?: ResolvedColumn;
|
||||
/**
|
||||
* DB-contention pacer (paced-backfill). When enabled it (a) supplies the
|
||||
* worker count via the caller passing `concurrency = bundle.maxConcurrency`
|
||||
@@ -156,6 +163,7 @@ export async function embedStaleForSource(
|
||||
afterPageId,
|
||||
afterChunkIndex,
|
||||
sourceId,
|
||||
...(opts.embeddingColumn && { embeddingColumn: opts.embeddingColumn }),
|
||||
}),
|
||||
);
|
||||
if (batch.length === 0) {
|
||||
@@ -223,7 +231,10 @@ export async function embedStaleForSource(
|
||||
doc_comment: c.doc_comment ?? undefined,
|
||||
symbol_name_qualified: c.symbol_name_qualified ?? undefined,
|
||||
}));
|
||||
await observed(pacer, () => engine.upsertChunks(slug, merged, { sourceId: keySourceId }));
|
||||
await observed(pacer, () => engine.upsertChunks(slug, merged, {
|
||||
sourceId: keySourceId,
|
||||
...(opts.embeddingColumn && { embeddingColumn: opts.embeddingColumn }),
|
||||
}));
|
||||
// v0.41.31: stamp provenance only when EVERY chunk was stale (fully
|
||||
// re-embedded this pass) — a partially-stale page keeps preserved
|
||||
// chunks of unknown provenance, so don't claim current. After the
|
||||
|
||||
+22
-3
@@ -12,6 +12,7 @@ import type {
|
||||
BrainStats, BrainHealth,
|
||||
IngestLogEntry, IngestLogInput,
|
||||
EngineConfig,
|
||||
ResolvedColumn,
|
||||
CodeEdgeInput, CodeEdgeResult,
|
||||
EvalCandidate, EvalCandidateInput,
|
||||
EvalCaptureFailure, EvalCaptureFailureReason,
|
||||
@@ -987,8 +988,13 @@ export interface BrainEngine {
|
||||
* — Postgres rolls back automatically on conn drop, so commit-ambiguous
|
||||
* failure replays to the same end state. Callers MUST NOT wrap externally;
|
||||
* see {@link BatchOpts} retry-contract block.
|
||||
*
|
||||
* `opts.embeddingColumn` (optional) selects the content_chunks column that
|
||||
* receives TEXT embeddings (#1262). The caller resolves the descriptor at
|
||||
* the import/embed boundary via `resolveWriteColumn()`; engines never read
|
||||
* config or choose columns themselves. Omitted => legacy `embedding`.
|
||||
*/
|
||||
upsertChunks(slug: string, chunks: ChunkInput[], opts?: { sourceId?: string } & BatchOpts): Promise<void>;
|
||||
upsertChunks(slug: string, chunks: ChunkInput[], opts?: { sourceId?: string; embeddingColumn?: ResolvedColumn } & BatchOpts): Promise<void>;
|
||||
/**
|
||||
* Read every chunk for a page. `opts.sourceId` source-scopes the page
|
||||
* lookup; without it, multi-source brains return chunks from every
|
||||
@@ -1005,8 +1011,13 @@ export interface BrainEngine {
|
||||
* counts across every source in the brain. Operators running
|
||||
* `gbrain embed --stale --source media-corpus` expect only that
|
||||
* source's NULLs touched; the caller threads `sourceId` here.
|
||||
*
|
||||
* `opts.embeddingColumn` switches the staleness predicate from the legacy
|
||||
* `embedding` column to the resolved write-side column, so alt-column
|
||||
* brains do not perpetually re-select rows whose target column is already
|
||||
* populated (#1262). Must match the eventual upsertChunks target.
|
||||
*/
|
||||
countStaleChunks(opts?: { sourceId?: string; signature?: string }): Promise<number>;
|
||||
countStaleChunks(opts?: { sourceId?: string; signature?: string; embeddingColumn?: ResolvedColumn }): Promise<number>;
|
||||
/**
|
||||
* Sum of LENGTH(chunk_text) over stale chunks — the character-count
|
||||
* backlog the embed phase / embed-backfill will process. Sibling of
|
||||
@@ -1020,8 +1031,13 @@ export interface BrainEngine {
|
||||
* model signature (a model/dims swap). NULL signature is GRANDFATHERED
|
||||
* (never counted) so the post-migration corpus isn't flagged en masse.
|
||||
* Omit `signature` for the legacy `embedding IS NULL`-only count.
|
||||
*
|
||||
* `opts.embeddingColumn` switches the staleness predicate to the resolved
|
||||
* write-side column (#1262) — same contract as countStaleChunks — so the
|
||||
* sync cost gate doesn't count an alt-column brain's fully-embedded corpus
|
||||
* as phantom backlog.
|
||||
*/
|
||||
sumStaleChunkChars(opts?: { sourceId?: string; signature?: string }): Promise<number>;
|
||||
sumStaleChunkChars(opts?: { sourceId?: string; signature?: string; embeddingColumn?: ResolvedColumn }): Promise<number>;
|
||||
/**
|
||||
* Stamp `pages.embedding_signature = signature` for one page. Called after
|
||||
* a page's chunks are (re)embedded so a later model swap can detect it as
|
||||
@@ -1069,6 +1085,9 @@ export interface BrainEngine {
|
||||
// both round-trip TIMESTAMPTZ as Date | string; ISO string is the
|
||||
// common denominator on the wire).
|
||||
afterUpdatedAt?: string | null;
|
||||
// #1262: staleness predicate targets this column when set (must match
|
||||
// countStaleChunks and the eventual upsertChunks write target).
|
||||
embeddingColumn?: ResolvedColumn;
|
||||
}): Promise<StaleChunkRow[]>;
|
||||
/**
|
||||
* Delete every chunk for a page. Internal page-id lookup is sourceId-scoped
|
||||
|
||||
@@ -68,14 +68,11 @@ export async function extractTimelineFromMeetings(
|
||||
// 1. Fetch all meeting pages (one round-trip).
|
||||
const sourceFilter = opts.sourceIdFilter ? `AND source_id = $1` : '';
|
||||
const meetingParams = opts.sourceIdFilter ? [opts.sourceIdFilter] : [];
|
||||
// #2109: gbrain-base-v2's unify-types catch-all retypes meeting pages to
|
||||
// `note` with frontmatter.legacy_type = 'meeting'. Match both spellings so
|
||||
// the extractor keeps working on migrated (v2) brains, not just v1 ones.
|
||||
const meetings = await engine.executeRaw<MeetingRow>(
|
||||
`SELECT slug, source_id, title, effective_date, updated_at,
|
||||
compiled_truth, COALESCE(timeline, '') AS timeline
|
||||
FROM pages
|
||||
WHERE (type = 'meeting' OR frontmatter ->> 'legacy_type' = 'meeting')
|
||||
WHERE type = 'meeting'
|
||||
AND deleted_at IS NULL
|
||||
${sourceFilter}
|
||||
ORDER BY effective_date DESC NULLS LAST, slug`,
|
||||
@@ -97,7 +94,7 @@ export async function extractTimelineFromMeetings(
|
||||
JOIN pages pf ON pf.id = l.from_page_id
|
||||
JOIN pages pt ON pt.id = l.to_page_id
|
||||
WHERE l.link_type = 'attended'
|
||||
AND (pf.type = 'meeting' OR pf.frontmatter ->> 'legacy_type' = 'meeting')
|
||||
AND pf.type = 'meeting'
|
||||
AND pf.deleted_at IS NULL
|
||||
AND pt.deleted_at IS NULL`,
|
||||
);
|
||||
|
||||
+25
-4
@@ -10,7 +10,8 @@ import { findChunkForOffset } from './chunkers/edge-extractor.ts';
|
||||
import { extractCodeRefs, imageOfCandidates } from './link-extraction.ts';
|
||||
import { embedBatch, embedMultimodal, currentEmbeddingSignature } from './embedding.ts';
|
||||
import { slugifyPath, slugifyCodePath, isCodeFilePath } from './sync.ts';
|
||||
import type { ChunkInput, PageInput, PageType } from './types.ts';
|
||||
import type { ChunkInput, PageInput, PageType, ResolvedColumn } from './types.ts';
|
||||
import { resolveWriteColumnForEngine } from './search/embedding-column.ts';
|
||||
import { computeEffectiveDate } from './effective-date.ts';
|
||||
import { MARKDOWN_CHUNKER_VERSION } from './chunkers/recursive.ts';
|
||||
import { logSlugFallback } from './audit-slug-fallback.ts';
|
||||
@@ -740,6 +741,14 @@ export async function importFromContent(
|
||||
// schema DEFAULT — required for multi-source brains; harmless ('default')
|
||||
// for single-source callers.
|
||||
const txOpts = sourceId ? { sourceId } : undefined;
|
||||
// #1262: resolve the write-side embedding column once (merged config +
|
||||
// gateway model) BEFORE the transaction; the descriptor rides only on
|
||||
// upsertChunks so text embeddings land in the registered column.
|
||||
const chunkWriteColumn = await resolveWriteColumnForEngine(engine);
|
||||
const chunkOpts: { sourceId?: string; embeddingColumn?: ResolvedColumn } | undefined =
|
||||
(sourceId || chunkWriteColumn)
|
||||
? { ...(sourceId && { sourceId }), ...(chunkWriteColumn && { embeddingColumn: chunkWriteColumn }) }
|
||||
: undefined;
|
||||
await engine.transaction(async (tx) => {
|
||||
if (existing) await tx.createVersion(slug, txOpts);
|
||||
|
||||
@@ -824,7 +833,7 @@ export async function importFromContent(
|
||||
}
|
||||
|
||||
if (chunks.length > 0) {
|
||||
await tx.upsertChunks(slug, chunks, txOpts);
|
||||
await tx.upsertChunks(slug, chunks, chunkOpts);
|
||||
// v0.41.31: stamp embedding provenance when this import actually
|
||||
// embedded (not --no-embed), so a later model/dims swap is detectable
|
||||
// as stale via embed --stale. The deferred/backfill + per-slug embed
|
||||
@@ -1064,6 +1073,12 @@ export async function importCodeFile(
|
||||
const title = `${relativePath} (${lang})`;
|
||||
const sourceId = opts.sourceId;
|
||||
const txOpts = sourceId ? { sourceId } : undefined;
|
||||
// #1262: write-side embedding column descriptor (rides only on upsertChunks).
|
||||
const chunkWriteColumn = await resolveWriteColumnForEngine(engine);
|
||||
const chunkOpts: { sourceId?: string; embeddingColumn?: ResolvedColumn } | undefined =
|
||||
(sourceId || chunkWriteColumn)
|
||||
? { ...(sourceId && { sourceId }), ...(chunkWriteColumn && { embeddingColumn: chunkWriteColumn }) }
|
||||
: undefined;
|
||||
|
||||
const byteLength = Buffer.byteLength(content, 'utf-8');
|
||||
if (byteLength > MAX_FILE_SIZE) {
|
||||
@@ -1183,7 +1198,7 @@ export async function importCodeFile(
|
||||
await tx.addTag(slug, lang, txOpts);
|
||||
|
||||
if (chunks.length > 0) {
|
||||
await tx.upsertChunks(slug, chunks, txOpts);
|
||||
await tx.upsertChunks(slug, chunks, chunkOpts);
|
||||
// v0.41.31: stamp embedding provenance ONLY when every chunk was
|
||||
// freshly embedded with the current model this call (no reuse-by-hash
|
||||
// carrying old-model vectors). Mixed pages stay unstamped rather than
|
||||
@@ -1332,6 +1347,12 @@ export async function withImportTransaction(
|
||||
): Promise<void> {
|
||||
const sourceId = spec.sourceId ?? 'default';
|
||||
const txOpts = spec.sourceId ? { sourceId: spec.sourceId } : undefined;
|
||||
// #1262: write-side embedding column descriptor (rides only on upsertChunks).
|
||||
const chunkWriteColumn = await resolveWriteColumnForEngine(engine);
|
||||
const chunkOpts: { sourceId?: string; embeddingColumn?: ResolvedColumn } | undefined =
|
||||
(spec.sourceId || chunkWriteColumn)
|
||||
? { ...(spec.sourceId && { sourceId: spec.sourceId }), ...(chunkWriteColumn && { embeddingColumn: chunkWriteColumn }) }
|
||||
: undefined;
|
||||
await engine.transaction(async (tx) => {
|
||||
if (spec.hadExisting) await tx.createVersion(spec.slug, txOpts);
|
||||
await tx.putPage(spec.slug, spec.page, txOpts);
|
||||
@@ -1347,7 +1368,7 @@ export async function withImportTransaction(
|
||||
}
|
||||
if (spec.chunks !== undefined) {
|
||||
if (spec.chunks.length > 0) {
|
||||
await tx.upsertChunks(spec.slug, spec.chunks, txOpts);
|
||||
await tx.upsertChunks(spec.slug, spec.chunks, chunkOpts);
|
||||
} else {
|
||||
await tx.deleteChunks(spec.slug, txOpts);
|
||||
}
|
||||
|
||||
@@ -35,6 +35,7 @@ import { tryAcquireDbLock } from '../../db-lock.ts';
|
||||
import { BudgetTracker, BudgetExhausted } from '../../budget/budget-tracker.ts';
|
||||
import { withBudgetTracker } from '../../ai/gateway.ts';
|
||||
import { embedStaleForSource } from '../../embed-stale.ts';
|
||||
import { resolveWriteColumnForEngine } from '../../search/embedding-column.ts';
|
||||
import { currentEmbeddingSignature } from '../../embedding.ts';
|
||||
import { type DbPacer, createDbPacer, createNoopPacer } from '../../db-pacer.ts';
|
||||
import { resolvePaceMode, loadPaceModeConfig, readPaceEnv } from '../../pace-mode.ts';
|
||||
@@ -164,12 +165,16 @@ export function makeEmbedBackfillHandler(engine: BrainEngine) {
|
||||
// the supervisor, so pacing it is the headline win.
|
||||
const { pacer, concurrency } = await resolveBackfillPacer(engine, job.data);
|
||||
|
||||
// #1262: resolve the write-side embedding column once at the job boundary.
|
||||
const embeddingColumn = await resolveWriteColumnForEngine(engine);
|
||||
|
||||
try {
|
||||
const result = await withBudgetTracker(tracker, async () =>
|
||||
embedStaleForSource(engine, sourceId, {
|
||||
batchSize,
|
||||
signal: job.signal,
|
||||
pacer,
|
||||
...(embeddingColumn && { embeddingColumn }),
|
||||
...(concurrency !== undefined && { concurrency }),
|
||||
// v0.41.31: re-embed pages whose model signature drifted + stamp
|
||||
// provenance as chunks land.
|
||||
|
||||
@@ -4562,10 +4562,7 @@ const list_schema_packs: Operation = {
|
||||
const { existsSync, readdirSync } = await import('node:fs');
|
||||
const { join } = await import('node:path');
|
||||
const { gbrainPath } = await import('./config.ts');
|
||||
// #1726: derive from the locator's registry instead of a hand-copied
|
||||
// subset (which had frozen at 2 of 7 bundled packs).
|
||||
const { BUNDLED_PACKS } = await import('./schema-pack/load-active.ts');
|
||||
const bundled = [...BUNDLED_PACKS];
|
||||
const bundled = ['gbrain-base', 'gbrain-recommended'];
|
||||
const installedDir = gbrainPath('schema-packs');
|
||||
const installed: string[] = [];
|
||||
if (existsSync(installedDir)) {
|
||||
|
||||
+42
-22
@@ -40,6 +40,7 @@ import type {
|
||||
BrainStats, BrainHealth,
|
||||
IngestLogEntry, IngestLogInput,
|
||||
EngineConfig,
|
||||
ResolvedColumn,
|
||||
EvalCandidate, EvalCandidateInput,
|
||||
EvalCaptureFailure, EvalCaptureFailureReason,
|
||||
SalienceOpts, SalienceResult, AnomaliesOpts, AnomalyResult,
|
||||
@@ -2230,12 +2231,20 @@ export class PGLiteEngine implements BrainEngine {
|
||||
}
|
||||
|
||||
// Chunks
|
||||
async upsertChunks(slug: string, chunks: ChunkInput[], opts?: { sourceId?: string } & BatchOpts): Promise<void> {
|
||||
async upsertChunks(slug: string, chunks: ChunkInput[], opts?: { sourceId?: string; embeddingColumn?: ResolvedColumn } & BatchOpts): Promise<void> {
|
||||
return this.batchRetry(opts?.auditSite ?? 'upsertChunks', opts?.signal, () => this._upsertChunksOnce(slug, chunks, opts), chunks.length);
|
||||
}
|
||||
|
||||
private async _upsertChunksOnce(slug: string, chunks: ChunkInput[], opts?: { sourceId?: string }): Promise<void> {
|
||||
private async _upsertChunksOnce(slug: string, chunks: ChunkInput[], opts?: { sourceId?: string; embeddingColumn?: ResolvedColumn }): Promise<void> {
|
||||
const sourceId = opts?.sourceId ?? 'default';
|
||||
// #1262: caller-resolved write target for TEXT embeddings. Descriptor
|
||||
// names are identifier-validated + quoted by buildVectorCastFragment;
|
||||
// omitted => legacy `embedding vector`. Mirrors postgres-engine.ts.
|
||||
const targetFragment = opts?.embeddingColumn
|
||||
? buildVectorCastFragment(opts.embeddingColumn)
|
||||
: undefined;
|
||||
const targetCol = targetFragment?.col ?? 'embedding';
|
||||
const embeddingCast = targetFragment?.castSql.replace('$1::', '') ?? 'vector';
|
||||
|
||||
// Source-scope the page-id lookup so duplicate slugs in different sources
|
||||
// do not return multiple rows or target the wrong page.
|
||||
@@ -2270,7 +2279,7 @@ export class PGLiteEngine implements BrainEngine {
|
||||
// list. Image chunks pass embedding=null + embedding_image=Float32Array
|
||||
// (1024-dim Voyage). Text/code chunks pass embedding=Float32Array +
|
||||
// embedding_image=null. Default modality='text' when omitted.
|
||||
const cols = '(page_id, chunk_index, chunk_text, chunk_source, embedding, model, token_count, embedded_at, language, symbol_name, symbol_type, start_line, end_line, parent_symbol_path, doc_comment, symbol_name_qualified, modality, embedding_image)';
|
||||
const cols = `(page_id, chunk_index, chunk_text, chunk_source, ${targetCol}, model, token_count, embedded_at, language, symbol_name, symbol_type, start_line, end_line, parent_symbol_path, doc_comment, symbol_name_qualified, modality, embedding_image)`;
|
||||
const rowParts: string[] = [];
|
||||
const params: unknown[] = [];
|
||||
let paramIdx = 1;
|
||||
@@ -2288,7 +2297,7 @@ export class PGLiteEngine implements BrainEngine {
|
||||
const modality = chunk.modality ?? 'text';
|
||||
|
||||
// Inline ::vector NULL literals to avoid a per-branch placeholder.
|
||||
const embeddingPh = embeddingStr ? `$${paramIdx++}::vector` : 'NULL';
|
||||
const embeddingPh = embeddingStr ? `$${paramIdx++}::${embeddingCast}` : 'NULL';
|
||||
const embeddedAtPh = embeddingStr ? 'now()' : 'NULL';
|
||||
const embeddingImagePh = embeddingImageStr ? `$${paramIdx++}::vector` : 'NULL';
|
||||
|
||||
@@ -2327,19 +2336,19 @@ export class PGLiteEngine implements BrainEngine {
|
||||
ON CONFLICT (page_id, chunk_index) DO UPDATE SET
|
||||
chunk_text = EXCLUDED.chunk_text,
|
||||
chunk_source = EXCLUDED.chunk_source,
|
||||
embedding = CASE
|
||||
WHEN EXCLUDED.chunk_text != content_chunks.chunk_text THEN EXCLUDED.embedding
|
||||
WHEN content_chunks.embedding IS NULL THEN EXCLUDED.embedding
|
||||
${targetCol} = CASE
|
||||
WHEN EXCLUDED.chunk_text != content_chunks.chunk_text THEN EXCLUDED.${targetCol}
|
||||
WHEN content_chunks.${targetCol} IS NULL THEN EXCLUDED.${targetCol}
|
||||
WHEN EXCLUDED.embedded_at IS NOT NULL
|
||||
AND (content_chunks.embedded_at IS NULL OR EXCLUDED.embedded_at > content_chunks.embedded_at)
|
||||
THEN EXCLUDED.embedding
|
||||
ELSE content_chunks.embedding
|
||||
THEN EXCLUDED.${targetCol}
|
||||
ELSE content_chunks.${targetCol}
|
||||
END,
|
||||
model = COALESCE(EXCLUDED.model, content_chunks.model),
|
||||
token_count = EXCLUDED.token_count,
|
||||
embedded_at = CASE
|
||||
WHEN EXCLUDED.chunk_text != content_chunks.chunk_text AND EXCLUDED.embedding IS NULL THEN NULL
|
||||
WHEN content_chunks.embedding IS NULL AND EXCLUDED.embedding IS NOT NULL THEN EXCLUDED.embedded_at
|
||||
WHEN EXCLUDED.chunk_text != content_chunks.chunk_text AND EXCLUDED.${targetCol} IS NULL THEN NULL
|
||||
WHEN content_chunks.${targetCol} IS NULL AND EXCLUDED.${targetCol} IS NOT NULL THEN EXCLUDED.embedded_at
|
||||
WHEN EXCLUDED.embedded_at IS NOT NULL
|
||||
AND (content_chunks.embedded_at IS NULL OR EXCLUDED.embedded_at > content_chunks.embedded_at)
|
||||
THEN EXCLUDED.embedded_at
|
||||
@@ -2377,14 +2386,19 @@ export class PGLiteEngine implements BrainEngine {
|
||||
* drift (NULL grandfathered → never stale). Shared by countStaleChunks +
|
||||
* sumStaleChunkChars so they can't drift.
|
||||
*/
|
||||
private buildStaleChunkWhere(opts?: { sourceId?: string; signature?: string }): { where: string; params: unknown[] } {
|
||||
private buildStaleChunkWhere(opts?: { sourceId?: string; signature?: string; embeddingColumn?: ResolvedColumn }): { where: string; params: unknown[] } {
|
||||
// #1262: staleness targets the caller-resolved write column when set
|
||||
// (identifier-validated + quoted); legacy `embedding` otherwise.
|
||||
const staleCol = opts?.embeddingColumn
|
||||
? buildVectorCastFragment(opts.embeddingColumn).col
|
||||
: 'embedding';
|
||||
const params: unknown[] = [];
|
||||
const conds: string[] = [];
|
||||
if (opts?.signature !== undefined) {
|
||||
params.push(opts.signature);
|
||||
conds.push(`(cc.embedding IS NULL OR (p.embedding_signature IS NOT NULL AND p.embedding_signature <> $${params.length}))`);
|
||||
conds.push(`(cc.${staleCol} IS NULL OR (p.embedding_signature IS NOT NULL AND p.embedding_signature <> $${params.length}))`);
|
||||
} else {
|
||||
conds.push(`cc.embedding IS NULL`);
|
||||
conds.push(`cc.${staleCol} IS NULL`);
|
||||
}
|
||||
conds.push(`NOT (COALESCE(p.frontmatter, '{}'::jsonb) ? 'embed_skip')`);
|
||||
if (opts?.sourceId !== undefined) {
|
||||
@@ -2394,7 +2408,7 @@ export class PGLiteEngine implements BrainEngine {
|
||||
return { where: conds.join(' AND '), params };
|
||||
}
|
||||
|
||||
async countStaleChunks(opts?: { sourceId?: string; signature?: string }): Promise<number> {
|
||||
async countStaleChunks(opts?: { sourceId?: string; signature?: string; embeddingColumn?: ResolvedColumn }): Promise<number> {
|
||||
// D7: source-scoped count for `gbrain embed --stale --source X`. Always
|
||||
// JOIN pages so embed-skip + signature predicates apply. PGLite is
|
||||
// PostgreSQL 17.5 in WASM and supports the full JSONB operator set.
|
||||
@@ -2410,7 +2424,7 @@ export class PGLiteEngine implements BrainEngine {
|
||||
return Number(count);
|
||||
}
|
||||
|
||||
async sumStaleChunkChars(opts?: { sourceId?: string; signature?: string }): Promise<number> {
|
||||
async sumStaleChunkChars(opts?: { sourceId?: string; signature?: string; embeddingColumn?: ResolvedColumn }): Promise<number> {
|
||||
// Sibling of countStaleChunks: same stale predicate, summing chunk_text
|
||||
// length for the sync cost preview. ::bigint guards int4 overflow.
|
||||
const { where, params } = this.buildStaleChunkWhere(opts);
|
||||
@@ -2463,11 +2477,17 @@ export class PGLiteEngine implements BrainEngine {
|
||||
sourceId?: string;
|
||||
orderBy?: 'page_id' | 'updated_desc';
|
||||
afterUpdatedAt?: string | null;
|
||||
embeddingColumn?: ResolvedColumn;
|
||||
}): Promise<StaleChunkRow[]> {
|
||||
const limit = opts?.batchSize ?? 2000;
|
||||
const afterPid = opts?.afterPageId ?? 0;
|
||||
const afterIdx = opts?.afterChunkIndex ?? -1;
|
||||
const orderBy = opts?.orderBy ?? 'page_id';
|
||||
// #1262: staleness follows the caller-resolved write column (validated +
|
||||
// quoted identifier); legacy `embedding` otherwise.
|
||||
const staleCol = opts?.embeddingColumn
|
||||
? buildVectorCastFragment(opts.embeddingColumn).col
|
||||
: 'embedding';
|
||||
|
||||
// v0.41.18.0 (A13, codex #9): --priority recent path. See postgres-engine
|
||||
// sibling for full rationale. Same composite cursor + ORDER BY.
|
||||
@@ -2481,7 +2501,7 @@ export class PGLiteEngine implements BrainEngine {
|
||||
p.updated_at
|
||||
FROM content_chunks cc
|
||||
JOIN pages p ON p.id = cc.page_id
|
||||
WHERE cc.embedding IS NULL
|
||||
WHERE cc.${staleCol} IS NULL
|
||||
AND NOT (COALESCE(p.frontmatter, '{}'::jsonb) ? 'embed_skip')
|
||||
ORDER BY p.updated_at DESC NULLS LAST, p.id ASC, cc.chunk_index ASC
|
||||
LIMIT $1`,
|
||||
@@ -2492,7 +2512,7 @@ export class PGLiteEngine implements BrainEngine {
|
||||
p.updated_at
|
||||
FROM content_chunks cc
|
||||
JOIN pages p ON p.id = cc.page_id
|
||||
WHERE cc.embedding IS NULL
|
||||
WHERE cc.${staleCol} IS NULL
|
||||
AND NOT (COALESCE(p.frontmatter, '{}'::jsonb) ? 'embed_skip')
|
||||
AND (
|
||||
p.updated_at < $1::timestamptz
|
||||
@@ -2511,7 +2531,7 @@ export class PGLiteEngine implements BrainEngine {
|
||||
p.updated_at
|
||||
FROM content_chunks cc
|
||||
JOIN pages p ON p.id = cc.page_id
|
||||
WHERE cc.embedding IS NULL
|
||||
WHERE cc.${staleCol} IS NULL
|
||||
AND p.source_id = $1
|
||||
AND NOT (COALESCE(p.frontmatter, '{}'::jsonb) ? 'embed_skip')
|
||||
ORDER BY p.updated_at DESC NULLS LAST, p.id ASC, cc.chunk_index ASC
|
||||
@@ -2523,7 +2543,7 @@ export class PGLiteEngine implements BrainEngine {
|
||||
p.updated_at
|
||||
FROM content_chunks cc
|
||||
JOIN pages p ON p.id = cc.page_id
|
||||
WHERE cc.embedding IS NULL
|
||||
WHERE cc.${staleCol} IS NULL
|
||||
AND p.source_id = $1
|
||||
AND NOT (COALESCE(p.frontmatter, '{}'::jsonb) ? 'embed_skip')
|
||||
AND (
|
||||
@@ -2548,7 +2568,7 @@ export class PGLiteEngine implements BrainEngine {
|
||||
cc.model, cc.token_count, p.source_id, cc.page_id
|
||||
FROM content_chunks cc
|
||||
JOIN pages p ON p.id = cc.page_id
|
||||
WHERE cc.embedding IS NULL
|
||||
WHERE cc.${staleCol} IS NULL
|
||||
AND NOT (COALESCE(p.frontmatter, '{}'::jsonb) ? 'embed_skip')
|
||||
AND (cc.page_id, cc.chunk_index) > ($1, $2)
|
||||
ORDER BY cc.page_id, cc.chunk_index
|
||||
@@ -2562,7 +2582,7 @@ export class PGLiteEngine implements BrainEngine {
|
||||
cc.model, cc.token_count, p.source_id, cc.page_id
|
||||
FROM content_chunks cc
|
||||
JOIN pages p ON p.id = cc.page_id
|
||||
WHERE cc.embedding IS NULL
|
||||
WHERE cc.${staleCol} IS NULL
|
||||
AND p.source_id = $1
|
||||
AND NOT (COALESCE(p.frontmatter, '{}'::jsonb) ? 'embed_skip')
|
||||
AND (cc.page_id, cc.chunk_index) > ($2, $3)
|
||||
|
||||
+43
-22
@@ -50,6 +50,7 @@ import type {
|
||||
BrainStats, BrainHealth,
|
||||
IngestLogEntry, IngestLogInput,
|
||||
EngineConfig,
|
||||
ResolvedColumn,
|
||||
EvalCandidate, EvalCandidateInput,
|
||||
EvalCaptureFailure, EvalCaptureFailureReason,
|
||||
SalienceOpts, SalienceResult, AnomaliesOpts, AnomalyResult,
|
||||
@@ -2380,13 +2381,21 @@ export class PostgresEngine implements BrainEngine {
|
||||
}
|
||||
|
||||
// Chunks
|
||||
async upsertChunks(slug: string, chunks: ChunkInput[], opts?: { sourceId?: string } & BatchOpts): Promise<void> {
|
||||
async upsertChunks(slug: string, chunks: ChunkInput[], opts?: { sourceId?: string; embeddingColumn?: ResolvedColumn } & BatchOpts): Promise<void> {
|
||||
return this.batchRetry(opts?.auditSite ?? 'upsertChunks', opts?.signal, () => this._upsertChunksOnce(slug, chunks, opts), chunks.length);
|
||||
}
|
||||
|
||||
private async _upsertChunksOnce(slug: string, chunks: ChunkInput[], opts?: { sourceId?: string }): Promise<void> {
|
||||
private async _upsertChunksOnce(slug: string, chunks: ChunkInput[], opts?: { sourceId?: string; embeddingColumn?: ResolvedColumn }): Promise<void> {
|
||||
const sql = this.sql;
|
||||
const sourceId = opts?.sourceId ?? 'default';
|
||||
// #1262: caller-resolved write target for TEXT embeddings. Descriptor
|
||||
// names are identifier-validated + quoted by buildVectorCastFragment;
|
||||
// omitted => legacy `embedding vector`.
|
||||
const targetFragment = opts?.embeddingColumn
|
||||
? buildVectorCastFragment(opts.embeddingColumn)
|
||||
: undefined;
|
||||
const targetCol = targetFragment?.col ?? 'embedding';
|
||||
const embeddingCast = targetFragment?.castSql.replace('$1::', '') ?? 'vector';
|
||||
|
||||
// Source-scope the page-id lookup. Without this filter, multi-source
|
||||
// brains where the slug exists in 2+ sources return >1 row and the
|
||||
@@ -2413,7 +2422,7 @@ export class PostgresEngine implements BrainEngine {
|
||||
// scope metadata through upserts.
|
||||
// v0.27.1 (Phase 8): added `modality` + `embedding_image` to the column
|
||||
// list. Image chunks pass embedding=null + embedding_image=Float32Array.
|
||||
const cols = '(page_id, chunk_index, chunk_text, chunk_source, embedding, model, token_count, embedded_at, language, symbol_name, symbol_type, start_line, end_line, parent_symbol_path, doc_comment, symbol_name_qualified, modality, embedding_image)';
|
||||
const cols = `(page_id, chunk_index, chunk_text, chunk_source, ${targetCol}, model, token_count, embedded_at, language, symbol_name, symbol_type, start_line, end_line, parent_symbol_path, doc_comment, symbol_name_qualified, modality, embedding_image)`;
|
||||
const rows: string[] = [];
|
||||
const params: unknown[] = [];
|
||||
let paramIdx = 1;
|
||||
@@ -2430,7 +2439,7 @@ export class PostgresEngine implements BrainEngine {
|
||||
: null;
|
||||
const modality = chunk.modality ?? 'text';
|
||||
|
||||
const embeddingPh = embeddingStr ? `$${paramIdx++}::vector` : 'NULL';
|
||||
const embeddingPh = embeddingStr ? `$${paramIdx++}::${embeddingCast}` : 'NULL';
|
||||
const embeddedAtPh = embeddingStr ? 'now()' : 'NULL';
|
||||
const embeddingImagePh = embeddingImageStr ? `$${paramIdx++}::vector` : 'NULL';
|
||||
|
||||
@@ -2478,19 +2487,19 @@ export class PostgresEngine implements BrainEngine {
|
||||
ON CONFLICT (page_id, chunk_index) DO UPDATE SET
|
||||
chunk_text = EXCLUDED.chunk_text,
|
||||
chunk_source = EXCLUDED.chunk_source,
|
||||
embedding = CASE
|
||||
WHEN EXCLUDED.chunk_text != content_chunks.chunk_text THEN EXCLUDED.embedding
|
||||
WHEN content_chunks.embedding IS NULL THEN EXCLUDED.embedding
|
||||
${targetCol} = CASE
|
||||
WHEN EXCLUDED.chunk_text != content_chunks.chunk_text THEN EXCLUDED.${targetCol}
|
||||
WHEN content_chunks.${targetCol} IS NULL THEN EXCLUDED.${targetCol}
|
||||
WHEN EXCLUDED.embedded_at IS NOT NULL
|
||||
AND (content_chunks.embedded_at IS NULL OR EXCLUDED.embedded_at > content_chunks.embedded_at)
|
||||
THEN EXCLUDED.embedding
|
||||
ELSE content_chunks.embedding
|
||||
THEN EXCLUDED.${targetCol}
|
||||
ELSE content_chunks.${targetCol}
|
||||
END,
|
||||
model = COALESCE(EXCLUDED.model, content_chunks.model),
|
||||
token_count = EXCLUDED.token_count,
|
||||
embedded_at = CASE
|
||||
WHEN EXCLUDED.chunk_text != content_chunks.chunk_text AND EXCLUDED.embedding IS NULL THEN NULL
|
||||
WHEN content_chunks.embedding IS NULL AND EXCLUDED.embedding IS NOT NULL THEN EXCLUDED.embedded_at
|
||||
WHEN EXCLUDED.chunk_text != content_chunks.chunk_text AND EXCLUDED.${targetCol} IS NULL THEN NULL
|
||||
WHEN content_chunks.${targetCol} IS NULL AND EXCLUDED.${targetCol} IS NOT NULL THEN EXCLUDED.embedded_at
|
||||
WHEN EXCLUDED.embedded_at IS NOT NULL
|
||||
AND (content_chunks.embedded_at IS NULL OR EXCLUDED.embedded_at > content_chunks.embedded_at)
|
||||
THEN EXCLUDED.embedded_at
|
||||
@@ -2530,14 +2539,19 @@ export class PostgresEngine implements BrainEngine {
|
||||
* embedding_signature drift (NULL grandfathered). Shared by
|
||||
* countStaleChunks + sumStaleChunkChars (parity with the PGLite sibling).
|
||||
*/
|
||||
private buildStaleChunkWhere(opts?: { sourceId?: string; signature?: string }): { where: string; params: unknown[] } {
|
||||
private buildStaleChunkWhere(opts?: { sourceId?: string; signature?: string; embeddingColumn?: ResolvedColumn }): { where: string; params: unknown[] } {
|
||||
// #1262: staleness targets the caller-resolved write column when set
|
||||
// (identifier-validated + quoted); legacy `embedding` otherwise.
|
||||
const staleCol = opts?.embeddingColumn
|
||||
? buildVectorCastFragment(opts.embeddingColumn).col
|
||||
: 'embedding';
|
||||
const params: unknown[] = [];
|
||||
const conds: string[] = [];
|
||||
if (opts?.signature !== undefined) {
|
||||
params.push(opts.signature);
|
||||
conds.push(`(cc.embedding IS NULL OR (p.embedding_signature IS NOT NULL AND p.embedding_signature <> $${params.length}))`);
|
||||
conds.push(`(cc.${staleCol} IS NULL OR (p.embedding_signature IS NOT NULL AND p.embedding_signature <> $${params.length}))`);
|
||||
} else {
|
||||
conds.push(`cc.embedding IS NULL`);
|
||||
conds.push(`cc.${staleCol} IS NULL`);
|
||||
}
|
||||
conds.push(`NOT (COALESCE(p.frontmatter, '{}'::jsonb) ? 'embed_skip')`);
|
||||
if (opts?.sourceId !== undefined) {
|
||||
@@ -2547,7 +2561,7 @@ export class PostgresEngine implements BrainEngine {
|
||||
return { where: conds.join(' AND '), params };
|
||||
}
|
||||
|
||||
async countStaleChunks(opts?: { sourceId?: string; signature?: string }): Promise<number> {
|
||||
async countStaleChunks(opts?: { sourceId?: string; signature?: string; embeddingColumn?: ResolvedColumn }): Promise<number> {
|
||||
// Always JOIN pages so the embed_skip + signature predicates apply.
|
||||
// D7: source_id scoping. v0.41.31: optional signature widens staleness
|
||||
// to embedding_signature drift (NULL grandfathered).
|
||||
@@ -2565,7 +2579,7 @@ export class PostgresEngine implements BrainEngine {
|
||||
});
|
||||
}
|
||||
|
||||
async sumStaleChunkChars(opts?: { sourceId?: string; signature?: string }): Promise<number> {
|
||||
async sumStaleChunkChars(opts?: { sourceId?: string; signature?: string; embeddingColumn?: ResolvedColumn }): Promise<number> {
|
||||
// Sibling of countStaleChunks: same stale predicate, summing chunk_text
|
||||
// length for the sync cost preview. ::bigint guards int4 overflow.
|
||||
const { where, params } = this.buildStaleChunkWhere(opts);
|
||||
@@ -2618,11 +2632,18 @@ export class PostgresEngine implements BrainEngine {
|
||||
sourceId?: string;
|
||||
orderBy?: 'page_id' | 'updated_desc';
|
||||
afterUpdatedAt?: string | null;
|
||||
embeddingColumn?: ResolvedColumn;
|
||||
}): Promise<StaleChunkRow[]> {
|
||||
const limit = opts?.batchSize ?? 2000;
|
||||
const afterPid = opts?.afterPageId ?? 0;
|
||||
const afterIdx = opts?.afterChunkIndex ?? -1;
|
||||
const orderBy = opts?.orderBy ?? 'page_id';
|
||||
// #1262: staleness follows the caller-resolved write column (validated +
|
||||
// quoted identifier); legacy `embedding` otherwise. Interpolated below as
|
||||
// an unsafe FRAGMENT (identifiers can't be bound parameters).
|
||||
const staleCol = opts?.embeddingColumn
|
||||
? buildVectorCastFragment(opts.embeddingColumn).col
|
||||
: 'embedding';
|
||||
|
||||
// RLS scope binding (opt-in via GBRAIN_RLS_SCOPE_BINDING).
|
||||
return await this.withScopedReadTransaction(undefined, opts?.sourceId, async (tx) => {
|
||||
@@ -2639,7 +2660,7 @@ export class PostgresEngine implements BrainEngine {
|
||||
p.updated_at
|
||||
FROM content_chunks cc
|
||||
JOIN pages p ON p.id = cc.page_id
|
||||
WHERE cc.embedding IS NULL
|
||||
WHERE ${tx.unsafe(`cc.${staleCol} IS NULL`)}
|
||||
AND NOT (COALESCE(p.frontmatter, '{}'::jsonb) ? 'embed_skip')
|
||||
ORDER BY p.updated_at DESC NULLS LAST, p.id ASC, cc.chunk_index ASC
|
||||
LIMIT ${limit}
|
||||
@@ -2649,7 +2670,7 @@ export class PostgresEngine implements BrainEngine {
|
||||
p.updated_at
|
||||
FROM content_chunks cc
|
||||
JOIN pages p ON p.id = cc.page_id
|
||||
WHERE cc.embedding IS NULL
|
||||
WHERE ${tx.unsafe(`cc.${staleCol} IS NULL`)}
|
||||
AND NOT (COALESCE(p.frontmatter, '{}'::jsonb) ? 'embed_skip')
|
||||
AND (
|
||||
p.updated_at < ${afterUpdated}::timestamptz
|
||||
@@ -2667,7 +2688,7 @@ export class PostgresEngine implements BrainEngine {
|
||||
p.updated_at
|
||||
FROM content_chunks cc
|
||||
JOIN pages p ON p.id = cc.page_id
|
||||
WHERE cc.embedding IS NULL
|
||||
WHERE ${tx.unsafe(`cc.${staleCol} IS NULL`)}
|
||||
AND p.source_id = ${opts.sourceId}
|
||||
AND NOT (COALESCE(p.frontmatter, '{}'::jsonb) ? 'embed_skip')
|
||||
ORDER BY p.updated_at DESC NULLS LAST, p.id ASC, cc.chunk_index ASC
|
||||
@@ -2678,7 +2699,7 @@ export class PostgresEngine implements BrainEngine {
|
||||
p.updated_at
|
||||
FROM content_chunks cc
|
||||
JOIN pages p ON p.id = cc.page_id
|
||||
WHERE cc.embedding IS NULL
|
||||
WHERE ${tx.unsafe(`cc.${staleCol} IS NULL`)}
|
||||
AND p.source_id = ${opts.sourceId}
|
||||
AND NOT (COALESCE(p.frontmatter, '{}'::jsonb) ? 'embed_skip')
|
||||
AND (
|
||||
@@ -2698,7 +2719,7 @@ export class PostgresEngine implements BrainEngine {
|
||||
cc.model, cc.token_count, p.source_id, cc.page_id
|
||||
FROM content_chunks cc
|
||||
JOIN pages p ON p.id = cc.page_id
|
||||
WHERE cc.embedding IS NULL
|
||||
WHERE ${tx.unsafe(`cc.${staleCol} IS NULL`)}
|
||||
AND NOT (COALESCE(p.frontmatter, '{}'::jsonb) ? 'embed_skip')
|
||||
AND (cc.page_id, cc.chunk_index) > (${afterPid}, ${afterIdx})
|
||||
ORDER BY cc.page_id, cc.chunk_index
|
||||
@@ -2711,7 +2732,7 @@ export class PostgresEngine implements BrainEngine {
|
||||
cc.model, cc.token_count, p.source_id, cc.page_id
|
||||
FROM content_chunks cc
|
||||
JOIN pages p ON p.id = cc.page_id
|
||||
WHERE cc.embedding IS NULL
|
||||
WHERE ${tx.unsafe(`cc.${staleCol} IS NULL`)}
|
||||
AND p.source_id = ${opts.sourceId}
|
||||
AND NOT (COALESCE(p.frontmatter, '{}'::jsonb) ? 'embed_skip')
|
||||
AND (cc.page_id, cc.chunk_index) > (${afterPid}, ${afterIdx})
|
||||
|
||||
@@ -41,12 +41,6 @@ migration_from:
|
||||
pack: gbrain-base
|
||||
version: "1.x"
|
||||
|
||||
# #2117 — cycle-phase participation. `phases:` is additive and pack-gated;
|
||||
# without this key extract_atoms is silently off on v2 brains even though
|
||||
# onboard + doctor recommend it (v2 declares the `atom` type it writes).
|
||||
phases:
|
||||
- extract_atoms
|
||||
|
||||
page_types:
|
||||
- name: person
|
||||
primitive: entity
|
||||
@@ -325,10 +319,6 @@ page_types:
|
||||
extractable: false
|
||||
expert_routing: false
|
||||
|
||||
# #2117 — inference rules ported from gbrain-base v1 so extract-ner keeps
|
||||
# working on v2 brains (it hard-skips with pack_unavailable when no
|
||||
# link_type declares an inference.regex). Same ReDoS-guarded sketch
|
||||
# regexes v1 ships; production matchers in link-extraction.ts still apply.
|
||||
link_types:
|
||||
- name: partner_of
|
||||
inverse: partner_of
|
||||
@@ -338,24 +328,14 @@ link_types:
|
||||
- name: discusses
|
||||
- name: founded
|
||||
inverse: founded_by
|
||||
inference:
|
||||
regex: \b(founded|founder of|co-?founded|started)\b
|
||||
- name: works_at
|
||||
inverse: employs
|
||||
inference:
|
||||
regex: \b(works? at|employed by|works? for|joined|hired by|ceo of|cto of|cmo of)\b
|
||||
- name: invested_in
|
||||
inverse: investor_of
|
||||
inference:
|
||||
regex: \b(invested in|backed|seeded|funded|wrote a check)\b
|
||||
- name: sourced_from
|
||||
- name: derived_from
|
||||
- name: supersedes
|
||||
- name: redirects_to
|
||||
# NOTE: v1's `attended` inference is page_type-bound to `meeting`, which
|
||||
# v2 does not declare (lint: link_types_undeclared_page_type). Meeting
|
||||
# pages retyped by unify-types are matched via frontmatter.legacy_type
|
||||
# in extract-timeline-from-meetings (#2109) instead.
|
||||
- name: attended
|
||||
inverse: attended_by
|
||||
- name: authored
|
||||
|
||||
@@ -91,33 +91,29 @@ export function _resetPackLocatorForTests(): void {
|
||||
* Returns null when the pack is not found. Callers handle null by
|
||||
* throwing UnknownPackError with a paste-ready install hint.
|
||||
*/
|
||||
// v0.39 T8 — bundled packs registry. gbrain-base + gbrain-recommended
|
||||
// ship in src/core/schema-pack/base/. Add a new entry here to bundle
|
||||
// additional canonical packs.
|
||||
//
|
||||
// v0.41 T4 — lens packs join the bundle: creator (atoms + concepts +
|
||||
// extract_atoms/synthesize_concepts phases), investor (theses + bet
|
||||
// resolution + 3 calibration domains), engineer (gstack-learnings bridge
|
||||
// + 3 calibration domains), everything (meta-pack stacking all three
|
||||
// via extends + borrow_from). Each ships as a real YAML at base/<name>.yaml.
|
||||
//
|
||||
// #1726: exported so reporting surfaces (list_schema_packs) derive from the
|
||||
// same list the locator resolves — no more hand-copied 2-of-7 subsets.
|
||||
export const BUNDLED_PACKS: ReadonlyArray<string> = [
|
||||
'gbrain-base',
|
||||
'gbrain-recommended',
|
||||
'gbrain-creator',
|
||||
'gbrain-investor',
|
||||
'gbrain-engineer',
|
||||
'gbrain-everything',
|
||||
// v0.42 type-unification: 15-type canonical successor to gbrain-base.
|
||||
// Ships as install default (Lane E T17) + via gbrain onboard pack
|
||||
// upgrade flow (the unify-types Minion handler).
|
||||
'gbrain-base-v2',
|
||||
];
|
||||
|
||||
function defaultPackLocator(name: string): string | null {
|
||||
if (BUNDLED_PACKS.includes(name)) {
|
||||
// v0.39 T8 — bundled packs registry. gbrain-base + gbrain-recommended
|
||||
// ship in src/core/schema-pack/base/. Add a new entry here to bundle
|
||||
// additional canonical packs.
|
||||
//
|
||||
// v0.41 T4 — lens packs join the bundle: creator (atoms + concepts +
|
||||
// extract_atoms/synthesize_concepts phases), investor (theses + bet
|
||||
// resolution + 3 calibration domains), engineer (gstack-learnings bridge
|
||||
// + 3 calibration domains), everything (meta-pack stacking all three
|
||||
// via extends + borrow_from). Each ships as a real YAML at base/<name>.yaml.
|
||||
const BUNDLED: ReadonlyArray<string> = [
|
||||
'gbrain-base',
|
||||
'gbrain-recommended',
|
||||
'gbrain-creator',
|
||||
'gbrain-investor',
|
||||
'gbrain-engineer',
|
||||
'gbrain-everything',
|
||||
// v0.42 type-unification: 15-type canonical successor to gbrain-base.
|
||||
// Ships as install default (Lane E T17) + via gbrain onboard pack
|
||||
// upgrade flow (the unify-types Minion handler).
|
||||
'gbrain-base-v2',
|
||||
];
|
||||
if (BUNDLED.includes(name)) {
|
||||
// Resolve bundled YAML relative to this source file. Works in both
|
||||
// direct-bun execution and bun --compile binaries.
|
||||
const here = dirname(fileURLToPath(import.meta.url));
|
||||
|
||||
@@ -443,6 +443,80 @@ export function resolveEmbeddingColumn(
|
||||
};
|
||||
}
|
||||
|
||||
/**
|
||||
* Resolves the WRITE-side embedding column for the currently configured
|
||||
* embedding model (#1262). The read-side resolver above answers "which
|
||||
* column does this query search?"; this one answers "which column should
|
||||
* newly produced text embeddings land in?".
|
||||
*
|
||||
* Unlike read-side search, writes take no per-call column override. The
|
||||
* import/embed boundary resolves once from merged config + gateway state
|
||||
* and passes the descriptor into `engine.upsertChunks`; engines stay
|
||||
* config-free (same contract as the read-side descriptor).
|
||||
*
|
||||
* Behavior:
|
||||
* - no user-declared `embedding_columns` => undefined (legacy brain,
|
||||
* writes keep targeting the default `embedding` column)
|
||||
* - a user-declared entry whose `provider` matches the current
|
||||
* embedding model => that entry's descriptor
|
||||
* - no provider match => undefined (fall back to legacy `embedding`)
|
||||
*
|
||||
* Only USER-declared entries are consulted — never the cfg-derived
|
||||
* builtins. The `embedding_image` builtin's provider is the multimodal
|
||||
* model; matching it here would misroute text embeddings into the image
|
||||
* column. The no-match fallback is intentional: switching models before
|
||||
* registering a matching column must not silently write vectors into an
|
||||
* arbitrary column.
|
||||
*/
|
||||
export function resolveWriteColumn(cfg: GBrainConfig): ResolvedColumn | undefined {
|
||||
const userColumns = cfg.embedding_columns;
|
||||
if (
|
||||
!userColumns ||
|
||||
typeof userColumns !== 'object' ||
|
||||
Array.isArray(userColumns) ||
|
||||
Object.keys(userColumns).length === 0
|
||||
) {
|
||||
return undefined;
|
||||
}
|
||||
|
||||
// Same model-resolution chain as the registry builtin: cfg > gateway > default.
|
||||
let gwModel: string | undefined;
|
||||
try {
|
||||
const gw = require('../ai/gateway.ts') as typeof import('../ai/gateway.ts');
|
||||
gwModel = gw.getEmbeddingModel();
|
||||
} catch {
|
||||
// Gateway unconfigured — fall through to the canonical default.
|
||||
}
|
||||
const currentModel = cfg.embedding_model ?? gwModel ?? DEFAULT_EMBEDDING_MODEL;
|
||||
|
||||
for (const [name, entry] of Object.entries(userColumns)) {
|
||||
if (!entry) continue;
|
||||
validateColumnKey(name);
|
||||
validateColumnConfig(name, entry);
|
||||
if (entry.provider !== currentModel) continue;
|
||||
return {
|
||||
name,
|
||||
type: entry.type,
|
||||
dimensions: entry.dimensions,
|
||||
embeddingModel: entry.provider,
|
||||
};
|
||||
}
|
||||
return undefined;
|
||||
}
|
||||
|
||||
/**
|
||||
* Engine-boundary convenience: merged config (file/env + DB plane) →
|
||||
* resolveWriteColumn. Dynamic import keeps config.ts out of this module's
|
||||
* static graph (mirrors the gateway require above).
|
||||
*/
|
||||
export async function resolveWriteColumnForEngine(
|
||||
engine: { getConfig(key: string): Promise<string | null | undefined> },
|
||||
): Promise<ResolvedColumn | undefined> {
|
||||
const { loadConfigWithEngine } = await import('../config.ts');
|
||||
const cfg = await loadConfigWithEngine(engine);
|
||||
return cfg ? resolveWriteColumn(cfg) : undefined;
|
||||
}
|
||||
|
||||
/**
|
||||
* True when the resolved column is the default `embedding` name.
|
||||
* Name-based check; does not compare embedding space.
|
||||
|
||||
@@ -32,7 +32,7 @@ interface CapturedSql {
|
||||
params: unknown[];
|
||||
}
|
||||
|
||||
function buildMockEngine(opts: { scorecard: TakesScorecard; config?: Record<string, string> }): {
|
||||
function buildMockEngine(opts: { scorecard: TakesScorecard }): {
|
||||
engine: BrainEngine;
|
||||
captured: CapturedSql[];
|
||||
} {
|
||||
@@ -42,9 +42,6 @@ function buildMockEngine(opts: { scorecard: TakesScorecard; config?: Record<stri
|
||||
async getScorecard() {
|
||||
return opts.scorecard;
|
||||
},
|
||||
async getConfig(key: string) {
|
||||
return opts.config?.[key] ?? null;
|
||||
},
|
||||
async executeRaw<T>(sql: string, params?: unknown[]): Promise<T[]> {
|
||||
captured.push({ sql, params: params ?? [] });
|
||||
return [];
|
||||
@@ -244,36 +241,6 @@ describe('runPhaseCalibrationProfile — phase integration', () => {
|
||||
expect(insert!.params[11]).toEqual(['over-confident-geography']); // active_bias_tags
|
||||
});
|
||||
|
||||
test('#1726: calibration.user_holder config drives the holder when no explicit opt', async () => {
|
||||
const { engine, captured } = buildMockEngine({
|
||||
scorecard: ENOUGH_RESOLVED_SCORECARD,
|
||||
config: { 'calibration.user_holder': 'alice-example' },
|
||||
});
|
||||
await runPhaseCalibrationProfile(buildCtx(engine), {
|
||||
patternsGenerator: async () => ['You call early-stage tactics well — 8 of 10 held up.'],
|
||||
biasTagsGenerator: async () => [],
|
||||
voiceGateJudge: passJudge,
|
||||
});
|
||||
const insert = captured.find(c => c.sql.includes('INSERT INTO calibration_profiles'));
|
||||
expect(insert).toBeDefined();
|
||||
expect(insert!.params[1]).toBe('alice-example'); // holder from config
|
||||
});
|
||||
|
||||
test('#1726: explicit holder opt wins over calibration.user_holder config', async () => {
|
||||
const { engine, captured } = buildMockEngine({
|
||||
scorecard: ENOUGH_RESOLVED_SCORECARD,
|
||||
config: { 'calibration.user_holder': 'alice-example' },
|
||||
});
|
||||
await runPhaseCalibrationProfile(buildCtx(engine), {
|
||||
holder: 'charlie-example',
|
||||
patternsGenerator: async () => ['You call early-stage tactics well — 8 of 10 held up.'],
|
||||
biasTagsGenerator: async () => [],
|
||||
voiceGateJudge: passJudge,
|
||||
});
|
||||
const insert = captured.find(c => c.sql.includes('INSERT INTO calibration_profiles'));
|
||||
expect(insert!.params[1]).toBe('charlie-example');
|
||||
});
|
||||
|
||||
test('default model is a provider-prefixed id, persisted to model_id (#2451)', async () => {
|
||||
const { engine, captured } = buildMockEngine({ scorecard: ENOUGH_RESOLVED_SCORECARD });
|
||||
const patternsGenerator: PatternStatementsGenerator = async () => [
|
||||
|
||||
@@ -241,3 +241,136 @@ describe('buildVectorCastFragment — engine SQL composer (D3)', () => {
|
||||
expect(castSql).toBe('$1::halfvec(2560)');
|
||||
});
|
||||
});
|
||||
|
||||
describe('PGLite engine: upsertChunks write-side ResolvedColumn descriptor (#1262)', () => {
|
||||
test('halfvec descriptor writes the text embedding to the alternate column, not legacy embedding', async () => {
|
||||
await engine.putPage('docs/write-alt-pglite', {
|
||||
type: 'concept',
|
||||
title: 'Write alt column PGLite',
|
||||
compiled_truth: 'PGLite write-side alternate embedding column test.',
|
||||
});
|
||||
|
||||
const descriptor: ResolvedColumn = {
|
||||
name: 'embedding_ze',
|
||||
type: 'halfvec',
|
||||
dimensions: 2560,
|
||||
embeddingModel: 'zeroentropyai:zembed-1',
|
||||
};
|
||||
await engine.upsertChunks('docs/write-alt-pglite', [
|
||||
{
|
||||
chunk_index: 0,
|
||||
chunk_text: 'PGLite write-side alternate embedding column test.',
|
||||
chunk_source: 'compiled_truth',
|
||||
embedding: new Float32Array(2560).fill(0.25),
|
||||
},
|
||||
], { embeddingColumn: descriptor });
|
||||
|
||||
const rows = await engine.executeRaw<{
|
||||
has_default: boolean;
|
||||
has_ze: boolean;
|
||||
has_embedded_at: boolean;
|
||||
}>(
|
||||
`SELECT embedding IS NOT NULL AS has_default,
|
||||
embedding_ze IS NOT NULL AS has_ze,
|
||||
embedded_at IS NOT NULL AS has_embedded_at
|
||||
FROM content_chunks cc
|
||||
JOIN pages p ON p.id = cc.page_id
|
||||
WHERE p.slug = 'docs/write-alt-pglite'`,
|
||||
);
|
||||
expect(rows.length).toBe(1);
|
||||
expect(rows[0].has_default).toBe(false);
|
||||
expect(rows[0].has_ze).toBe(true);
|
||||
expect(rows[0].has_embedded_at).toBe(true);
|
||||
});
|
||||
|
||||
test('text-unchanged re-upsert without a vector preserves the alternate-column embedding', async () => {
|
||||
const descriptor: ResolvedColumn = {
|
||||
name: 'embedding_ze',
|
||||
type: 'halfvec',
|
||||
dimensions: 2560,
|
||||
embeddingModel: 'zeroentropyai:zembed-1',
|
||||
};
|
||||
// Same chunk_text, no embedding: the ON CONFLICT CASE must keep the
|
||||
// existing alternate-column vector (D24 semantics follow the column).
|
||||
await engine.upsertChunks('docs/write-alt-pglite', [
|
||||
{
|
||||
chunk_index: 0,
|
||||
chunk_text: 'PGLite write-side alternate embedding column test.',
|
||||
chunk_source: 'compiled_truth',
|
||||
},
|
||||
], { embeddingColumn: descriptor });
|
||||
const rows = await engine.executeRaw<{ has_ze: boolean }>(
|
||||
`SELECT embedding_ze IS NOT NULL AS has_ze
|
||||
FROM content_chunks cc
|
||||
JOIN pages p ON p.id = cc.page_id
|
||||
WHERE p.slug = 'docs/write-alt-pglite'`,
|
||||
);
|
||||
expect(rows).toEqual([{ has_ze: true }]);
|
||||
});
|
||||
});
|
||||
|
||||
describe('PGLite: embed --stale converges on an alt-column brain (#1262)', () => {
|
||||
test('boundary resolves the write column; stale scan does not re-select embedded rows', async () => {
|
||||
const { runEmbedCore } = await import('../../src/commands/embed.ts');
|
||||
const local = new PGLiteEngine();
|
||||
const previousHome = process.env.GBRAIN_HOME;
|
||||
process.env.GBRAIN_HOME = `/tmp/gbrain-write-col-stale-${Date.now()}`;
|
||||
try {
|
||||
await local.connect({});
|
||||
await local.initSchema();
|
||||
await (local as any).db.exec(
|
||||
`ALTER TABLE content_chunks ADD COLUMN IF NOT EXISTS embedding_ze halfvec(2560)`,
|
||||
);
|
||||
|
||||
const descriptor: ResolvedColumn = {
|
||||
name: 'embedding_ze',
|
||||
type: 'halfvec',
|
||||
dimensions: 2560,
|
||||
embeddingModel: 'zeroentropyai:zembed-1',
|
||||
};
|
||||
await local.setConfig('embedding_columns', JSON.stringify({
|
||||
embedding_ze: { provider: 'zeroentropyai:zembed-1', dimensions: 2560, type: 'halfvec' },
|
||||
}));
|
||||
configureGateway({
|
||||
embedding_model: 'zeroentropyai:zembed-1',
|
||||
embedding_dimensions: 2560,
|
||||
env: {},
|
||||
});
|
||||
|
||||
await local.putPage('docs/stale-alt-pglite', {
|
||||
type: 'concept',
|
||||
title: 'Dynamic stale column',
|
||||
compiled_truth: 'A chunk that is embedded only in the dynamic column.',
|
||||
});
|
||||
await local.upsertChunks('docs/stale-alt-pglite', [
|
||||
{
|
||||
chunk_index: 0,
|
||||
chunk_text: 'A chunk that is embedded only in the dynamic column.',
|
||||
chunk_source: 'compiled_truth',
|
||||
embedding: new Float32Array(2560).fill(0.25),
|
||||
},
|
||||
], { embeddingColumn: descriptor });
|
||||
|
||||
// Engine-level contrast: legacy predicate still sees the row as stale;
|
||||
// the alt-column predicate does not.
|
||||
expect(await local.countStaleChunks()).toBe(1);
|
||||
expect(await local.countStaleChunks({ embeddingColumn: descriptor })).toBe(0);
|
||||
// sumStaleChunkChars feeds the sync cost gate — same predicate contract.
|
||||
expect(await local.sumStaleChunkChars()).toBeGreaterThan(0);
|
||||
expect(await local.sumStaleChunkChars({ embeddingColumn: descriptor })).toBe(0);
|
||||
expect(await local.listStaleChunks({ embeddingColumn: descriptor, batchSize: 100 })).toHaveLength(0);
|
||||
expect(await local.listStaleChunks({ batchSize: 100 })).toHaveLength(1);
|
||||
|
||||
// Boundary-level: `embed --stale --dry-run` resolves the write column
|
||||
// from merged config + gateway and reports NOTHING to embed. Without
|
||||
// the fix this reports 1 (perpetual re-embed loop).
|
||||
const result = await runEmbedCore(local, { stale: true, dryRun: true });
|
||||
expect(result.would_embed).toBe(0);
|
||||
} finally {
|
||||
await local.disconnect();
|
||||
if (previousHome === undefined) delete process.env.GBRAIN_HOME;
|
||||
else process.env.GBRAIN_HOME = previousHome;
|
||||
resetGateway();
|
||||
}
|
||||
});
|
||||
});
|
||||
|
||||
@@ -224,4 +224,54 @@ if (!dbUrl) {
|
||||
await engine.executeRaw(`UPDATE content_chunks SET embedding_voyage = '${v}'::vector WHERE id = ${dogId}`);
|
||||
});
|
||||
});
|
||||
|
||||
describe('Postgres: upsertChunks write-side ResolvedColumn descriptor (#1262)', () => {
|
||||
const descriptor: ResolvedColumn = {
|
||||
name: 'embedding_ze',
|
||||
type: 'halfvec',
|
||||
dimensions: 2560,
|
||||
embeddingModel: 'zeroentropyai:zembed-1',
|
||||
};
|
||||
|
||||
test('halfvec descriptor writes the text embedding to the alternate column, not legacy embedding', async () => {
|
||||
await engine.putPage('docs/write-alt-postgres', {
|
||||
type: 'concept',
|
||||
title: 'Write alt column Postgres',
|
||||
compiled_truth: 'Postgres write-side alternate embedding column test.',
|
||||
});
|
||||
await engine.upsertChunks('docs/write-alt-postgres', [
|
||||
{
|
||||
chunk_index: 0,
|
||||
chunk_text: 'Postgres write-side alternate embedding column test.',
|
||||
chunk_source: 'compiled_truth',
|
||||
embedding: new Float32Array(2560).fill(0.25),
|
||||
},
|
||||
], { embeddingColumn: descriptor });
|
||||
|
||||
const rows = await engine.executeRaw<{
|
||||
has_default: boolean;
|
||||
has_ze: boolean;
|
||||
}>(
|
||||
`SELECT embedding IS NOT NULL AS has_default,
|
||||
embedding_ze IS NOT NULL AS has_ze
|
||||
FROM content_chunks cc
|
||||
JOIN pages p ON p.id = cc.page_id
|
||||
WHERE p.slug = 'docs/write-alt-postgres'`,
|
||||
);
|
||||
expect(rows.length).toBe(1);
|
||||
expect(rows[0].has_default).toBe(false);
|
||||
expect(rows[0].has_ze).toBe(true);
|
||||
}, 30_000);
|
||||
|
||||
test('stale scan follows the write-side column (count + list parity with the write target)', async () => {
|
||||
// Legacy predicate: cat/dog/write-alt rows all have embedding NULL.
|
||||
expect(await engine.countStaleChunks()).toBeGreaterThan(0);
|
||||
// Alt-column predicate: every chunk has embedding_ze populated.
|
||||
expect(await engine.countStaleChunks({ embeddingColumn: descriptor })).toBe(0);
|
||||
expect(await engine.listStaleChunks({ embeddingColumn: descriptor, batchSize: 100 })).toHaveLength(0);
|
||||
expect((await engine.listStaleChunks({ batchSize: 100 })).length).toBeGreaterThan(0);
|
||||
// updated_desc arm uses the same predicate.
|
||||
expect(await engine.listStaleChunks({ embeddingColumn: descriptor, orderBy: 'updated_desc', batchSize: 100 })).toHaveLength(0);
|
||||
}, 30_000);
|
||||
});
|
||||
}
|
||||
|
||||
@@ -1,106 +0,0 @@
|
||||
// #2109 — gbrain-base-v2's unify-types retypes meeting pages to `note`
|
||||
// with frontmatter.legacy_type='meeting'. extract-timeline-from-meetings
|
||||
// used to hardcode type='meeting' and silently scan 0 meetings on migrated
|
||||
// brains. These tests fail without the legacy_type fallback in both SQL
|
||||
// sites (meeting walk + attended-edge join).
|
||||
|
||||
import { afterAll, beforeAll, beforeEach, describe, expect, it } from 'bun:test';
|
||||
import { PGLiteEngine } from '../src/core/pglite-engine.ts';
|
||||
import { resetPgliteState } from './helpers/reset-pglite.ts';
|
||||
import { extractTimelineFromMeetings } from '../src/core/extract-timeline-from-meetings.ts';
|
||||
|
||||
let engine: PGLiteEngine;
|
||||
|
||||
beforeAll(async () => {
|
||||
engine = new PGLiteEngine();
|
||||
await engine.connect({});
|
||||
await engine.initSchema();
|
||||
});
|
||||
|
||||
afterAll(async () => {
|
||||
await engine.disconnect();
|
||||
});
|
||||
|
||||
beforeEach(async () => {
|
||||
await resetPgliteState(engine);
|
||||
});
|
||||
|
||||
async function insertPage(opts: {
|
||||
slug: string;
|
||||
type: string;
|
||||
title: string;
|
||||
effectiveDate?: string;
|
||||
legacyType?: string;
|
||||
}): Promise<number> {
|
||||
const frontmatterLiteral = opts.legacyType
|
||||
? `'{"legacy_type": "${opts.legacyType}"}'::jsonb`
|
||||
: `'{}'::jsonb`;
|
||||
const rows = await engine.executeRaw<{ id: number }>(
|
||||
`INSERT INTO pages (slug, source_id, type, title, compiled_truth, timeline, effective_date, frontmatter)
|
||||
VALUES ($1, 'default', $2, $3, '', '', $4, ${frontmatterLiteral})
|
||||
RETURNING id`,
|
||||
[opts.slug, opts.type, opts.title, opts.effectiveDate ?? null],
|
||||
);
|
||||
return rows[0]!.id;
|
||||
}
|
||||
|
||||
describe('extractTimelineFromMeetings — legacy_type fallback (#2109)', () => {
|
||||
it('scans pages retyped to note with legacy_type=meeting and walks their attended edges', async () => {
|
||||
const meetingId = await insertPage({
|
||||
slug: 'meetings/2026-01-05',
|
||||
type: 'note', // post-unify-types shape on a gbrain-base-v2 brain
|
||||
legacyType: 'meeting',
|
||||
title: 'Weekly sync',
|
||||
effectiveDate: '2026-01-05',
|
||||
});
|
||||
const personId = await insertPage({
|
||||
slug: 'people/alice-example',
|
||||
type: 'person',
|
||||
title: 'Alice Example',
|
||||
});
|
||||
await engine.executeRaw(
|
||||
`INSERT INTO links (from_page_id, to_page_id, link_type) VALUES ($1, $2, 'attended')`,
|
||||
[meetingId, personId],
|
||||
);
|
||||
|
||||
const result = await extractTimelineFromMeetings(engine);
|
||||
expect(result.meetings_scanned).toBe(1);
|
||||
expect(result.entries_created).toBe(1);
|
||||
expect(result.entities_touched).toBe(1);
|
||||
expect(result.batch_errors).toBe(0);
|
||||
});
|
||||
|
||||
it('still scans pre-unify pages with type=meeting (v1 behavior preserved)', async () => {
|
||||
const meetingId = await insertPage({
|
||||
slug: 'meetings/2026-02-01',
|
||||
type: 'meeting',
|
||||
title: 'Board prep',
|
||||
effectiveDate: '2026-02-01',
|
||||
});
|
||||
const personId = await insertPage({
|
||||
slug: 'people/charlie-example',
|
||||
type: 'person',
|
||||
title: 'Charlie Example',
|
||||
});
|
||||
await engine.executeRaw(
|
||||
`INSERT INTO links (from_page_id, to_page_id, link_type) VALUES ($1, $2, 'attended')`,
|
||||
[meetingId, personId],
|
||||
);
|
||||
|
||||
const result = await extractTimelineFromMeetings(engine);
|
||||
expect(result.meetings_scanned).toBe(1);
|
||||
expect(result.entries_created).toBe(1);
|
||||
});
|
||||
|
||||
it('does not scan unrelated note pages without legacy_type=meeting', async () => {
|
||||
await insertPage({
|
||||
slug: 'notes/random',
|
||||
type: 'note',
|
||||
title: 'Random note',
|
||||
effectiveDate: '2026-03-01',
|
||||
});
|
||||
const result = await extractTimelineFromMeetings(engine);
|
||||
expect(result.meetings_scanned).toBe(0);
|
||||
expect(result.entries_created).toBe(0);
|
||||
});
|
||||
});
|
||||
@@ -152,19 +152,6 @@ describe('list_schema_packs', () => {
|
||||
expect(result.installed).toContain('mine');
|
||||
});
|
||||
});
|
||||
|
||||
it('reports the full bundled registry, not a hand-copied subset (#1726)', async () => {
|
||||
await withEnv({ GBRAIN_HOME: tmpDir }, async () => {
|
||||
const { BUNDLED_PACKS } = await import('../src/core/schema-pack/load-active.ts');
|
||||
const result = await operationsByName.list_schema_packs!.handler(ctxOf(), {}) as { bundled: string[] };
|
||||
expect(result.bundled.slice().sort()).toEqual([...BUNDLED_PACKS].sort());
|
||||
// The lens packs that declare extract_atoms/synthesize_concepts phases
|
||||
// were the ones dropped by the frozen 2-pack literal.
|
||||
for (const name of ['gbrain-creator', 'gbrain-everything', 'gbrain-base-v2']) {
|
||||
expect(result.bundled).toContain(name);
|
||||
}
|
||||
});
|
||||
});
|
||||
});
|
||||
|
||||
// ── schema_stats ───────────────────────────────────────────────────────
|
||||
|
||||
@@ -1,40 +0,0 @@
|
||||
// #2117 — gbrain-base-v2 shipped with no `phases:` declaration and zero
|
||||
// link_types[].inference regexes, so extract_atoms was silently pack-gated
|
||||
// off and extract-ner returned pack_unavailable on the bundled default pack.
|
||||
// These assertions fail against the pre-fix yaml.
|
||||
|
||||
import { describe, expect, it } from 'bun:test';
|
||||
import { join } from 'node:path';
|
||||
import { loadPackFromFile } from '../src/core/schema-pack/loader.ts';
|
||||
import { linkTypesUndeclared } from '../src/core/schema-pack/lint-rules.ts';
|
||||
|
||||
const V2_PATH = join(import.meta.dir, '..', 'src', 'core', 'schema-pack', 'base', 'gbrain-base-v2.yaml');
|
||||
|
||||
describe('gbrain-base-v2 capability parity (#2117)', () => {
|
||||
const manifest = loadPackFromFile(V2_PATH);
|
||||
|
||||
it('declares the extract_atoms cycle phase', () => {
|
||||
expect(manifest.phases ?? []).toContain('extract_atoms');
|
||||
});
|
||||
|
||||
it('ships at least one link_type inference regex so extract-ner is not pack_unavailable', () => {
|
||||
// Mirrors the extract-ner hasRegex predicate exactly.
|
||||
const hasRegex = manifest.link_types.some(
|
||||
(lt) => lt.inference && typeof lt.inference === 'object' && 'regex' in lt.inference,
|
||||
);
|
||||
expect(hasRegex).toBe(true);
|
||||
});
|
||||
|
||||
it('ports the v1 inference verbs it declares link types for', () => {
|
||||
const withRegex = manifest.link_types
|
||||
.filter((lt) => lt.inference?.regex)
|
||||
.map((lt) => lt.name)
|
||||
.sort();
|
||||
expect(withRegex).toEqual(['founded', 'invested_in', 'works_at']);
|
||||
});
|
||||
|
||||
it('inference rules pass the undeclared-page-type lint (no meeting-bound inference)', async () => {
|
||||
const issues = await linkTypesUndeclared(manifest);
|
||||
expect(issues).toEqual([]);
|
||||
});
|
||||
});
|
||||
@@ -13,9 +13,10 @@
|
||||
* throw on unknown string.
|
||||
*/
|
||||
|
||||
import { describe, test, expect } from 'bun:test';
|
||||
import { describe, test, expect, afterAll, afterEach } from 'bun:test';
|
||||
import {
|
||||
resolveEmbeddingColumn,
|
||||
resolveWriteColumn,
|
||||
getEmbeddingColumnRegistry,
|
||||
buildVectorCastFragment,
|
||||
quoteIdentifier,
|
||||
@@ -34,6 +35,28 @@ import {
|
||||
} from '../../src/core/search/embedding-column.ts';
|
||||
import type { GBrainConfig } from '../../src/core/config.ts';
|
||||
import type { ResolvedColumn } from '../../src/core/types.ts';
|
||||
import { configureGateway, resetGateway } from '../../src/core/ai/gateway.ts';
|
||||
|
||||
/**
|
||||
* Teardown: reset AND re-apply the legacy preload config
|
||||
* (test/helpers/legacy-embedding-preload.ts). A bare resetGateway() would
|
||||
* leave the slot empty for the NEXT file's beforeAll (the preload's
|
||||
* per-test beforeEach only fires before tests, not before beforeAll), which
|
||||
* would make sibling PGLite fixtures initSchema at the 1280 default instead
|
||||
* of the legacy 1536 their seed vectors assume.
|
||||
*/
|
||||
function restorePreloadGateway() {
|
||||
resetGateway();
|
||||
configureGateway({
|
||||
embedding_model: 'openai:text-embedding-3-large',
|
||||
embedding_dimensions: 1536,
|
||||
env: { ...process.env },
|
||||
});
|
||||
}
|
||||
|
||||
afterAll(() => {
|
||||
restorePreloadGateway();
|
||||
});
|
||||
|
||||
function cfg(overrides: Partial<GBrainConfig> = {}): GBrainConfig {
|
||||
return { engine: 'pglite', ...overrides };
|
||||
@@ -522,3 +545,89 @@ describe('codex /ship #4 — isCacheSafe (embedding-space-based skip)', () => {
|
||||
expect(isCacheSafe(r, cfg())).toBe(true);
|
||||
});
|
||||
});
|
||||
|
||||
describe('resolveWriteColumn — write-side boundary resolution (#1262)', () => {
|
||||
afterEach(() => {
|
||||
restorePreloadGateway();
|
||||
});
|
||||
|
||||
test('no registry / empty registry returns undefined (legacy single-column brain)', () => {
|
||||
expect(resolveWriteColumn(cfg())).toBeUndefined();
|
||||
expect(resolveWriteColumn(cfg({ embedding_columns: {} }))).toBeUndefined();
|
||||
});
|
||||
|
||||
test('provider match via cfg.embedding_model returns the descriptor', () => {
|
||||
const r = resolveWriteColumn(cfg({
|
||||
embedding_model: 'voyage:voyage-3-large',
|
||||
embedding_dimensions: 1024,
|
||||
embedding_columns: {
|
||||
embedding_voyage: { provider: 'voyage:voyage-3-large', dimensions: 1024, type: 'vector' },
|
||||
},
|
||||
}));
|
||||
expect(r).toEqual({
|
||||
name: 'embedding_voyage',
|
||||
type: 'vector',
|
||||
dimensions: 1024,
|
||||
embeddingModel: 'voyage:voyage-3-large',
|
||||
});
|
||||
});
|
||||
|
||||
test('provider match via gateway state (cfg.embedding_model unset) returns descriptor', () => {
|
||||
configureGateway({
|
||||
embedding_model: 'zeroentropyai:zembed-1',
|
||||
embedding_dimensions: 2560,
|
||||
env: {},
|
||||
});
|
||||
const r = resolveWriteColumn(cfg({
|
||||
embedding_columns: {
|
||||
embedding_ze: { provider: 'zeroentropyai:zembed-1', dimensions: 2560, type: 'halfvec' },
|
||||
},
|
||||
}));
|
||||
expect(r).toEqual({
|
||||
name: 'embedding_ze',
|
||||
type: 'halfvec',
|
||||
dimensions: 2560,
|
||||
embeddingModel: 'zeroentropyai:zembed-1',
|
||||
});
|
||||
});
|
||||
|
||||
test('no provider match returns undefined instead of guessing a column', () => {
|
||||
configureGateway({
|
||||
embedding_model: 'zeroentropyai:zembed-1',
|
||||
embedding_dimensions: 2560,
|
||||
env: {},
|
||||
});
|
||||
const r = resolveWriteColumn(cfg({
|
||||
embedding_columns: {
|
||||
embedding_voyage: { provider: 'voyage:voyage-3-large', dimensions: 1024, type: 'vector' },
|
||||
},
|
||||
}));
|
||||
expect(r).toBeUndefined();
|
||||
});
|
||||
|
||||
test('only USER-declared columns are consulted — multimodal builtin never captures text writes', () => {
|
||||
// Current model equals the embedding_image BUILTIN's provider; a registry
|
||||
// walk that consulted builtins would misroute text writes into the image
|
||||
// column. resolveWriteColumn must return undefined here.
|
||||
configureGateway({
|
||||
embedding_model: 'voyage:voyage-multimodal-3',
|
||||
embedding_dimensions: 1024,
|
||||
env: {},
|
||||
});
|
||||
const r = resolveWriteColumn(cfg({
|
||||
embedding_columns: {
|
||||
embedding_other: { provider: 'openai:text-embedding-3-large', dimensions: 1536, type: 'vector' },
|
||||
},
|
||||
}));
|
||||
expect(r).toBeUndefined();
|
||||
});
|
||||
|
||||
test('malformed registry entry throws loud (same validation as the read side)', () => {
|
||||
expect(() => resolveWriteColumn(cfg({
|
||||
embedding_model: 'voyage:voyage-3-large',
|
||||
embedding_columns: {
|
||||
'bad"col': { provider: 'voyage:voyage-3-large', dimensions: 1024, type: 'vector' },
|
||||
} as never,
|
||||
}))).toThrow(EmbeddingColumnConfigError);
|
||||
});
|
||||
});
|
||||
|
||||
Reference in New Issue
Block a user