test(supervisor): update runner fixture mock for #2750 lock path

tryAcquireDbLock now acquires via engine.executeRaw (signal-boundable)
and releases via engine.executeRawDirect instead of the sql tagged
template. The fixture's mock engine returned [] from executeRaw, so
every spawned supervisor failed lock acquisition and exited LOCK_HELD
(2), breaking all 8 supervisor integration tests. The mock now returns
the lock row for gbrain_cycle_locks queries and stubs executeRawDirect.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

src/commands/jobs.ts

@@ -2059,6 +2059,8 @@ export async function registerBuiltinHandlers(
         sourceId,
         windowSeconds,
         brainDir: repoPath,
+        // #2750: worker cancel/timeout/lock-loss propagates into the drain.
+        abortSignal: job.signal,
       });
     } catch (e) {
       if (e instanceof LockUnavailableError) {

src/core/cycle/extract-atoms-drain.ts

@@ -23,6 +23,10 @@
  */
 
 import type { BrainEngine } from '../engine.ts';
+import { anySignal } from '../abort-check.ts';
+
+/** Fresh cleanup budget for the lock release after the window signal fires. */
+const LOCK_RELEASE_GRACE_MS = 5_000;
 
 export interface ExtractAtomsDrainDeps {
   /**
@@ -30,13 +34,13 @@ export interface ExtractAtomsDrainDeps {
    * via `withRefreshingLock`. MUST throw when the lock is held by another
    * process (e.g. `LockUnavailableError`) — the drain lets that propagate so
    * the caller can report `cycle_already_running` and exit, matching the
-   * routine cycle's skip contract.
+   * routine cycle's skip contract. The signal bounds lock acquisition too.
    */
-  withLock: <T>(work: () => Promise<T>) => Promise<T>;
-  /** Process one bounded batch (rediscovers eligibility). Returns counts. */
-  runBatch: () => Promise<{ extracted: number; skipped: number }>;
+  withLock: <T>(work: () => Promise<T>, signal: AbortSignal) => Promise<T>;
+  /** Process one batch. The signal fires at the drain wallclock deadline. */
+  runBatch: (signal: AbortSignal) => Promise<{ extracted: number; skipped: number }>;
   /** Count remaining eligible-but-unextracted pages, or null on query error. */
-  countRemaining: () => Promise<number | null>;
+  countRemaining: (signal: AbortSignal) => Promise<number | null>;
   /** Injectable clock. Production: Date.now. */
   now: () => number;
   /** Optional progress sink (one line per batch). */
@@ -48,6 +52,8 @@ export interface ExtractAtomsDrainOpts {
   windowMs: number;
   /** Hard cap on batches (belt-and-suspenders against a 0-progress loop). Default 1000. */
   maxBatches?: number;
+  /** External caller cancellation (worker timeout / shutdown). */
+  abortSignal?: AbortSignal;
 }
 
 export interface ExtractAtomsDrainResult {
@@ -68,35 +74,79 @@ export async function runExtractAtomsDrain(
   opts: ExtractAtomsDrainOpts,
 ): Promise<ExtractAtomsDrainResult> {
   const maxBatches = opts.maxBatches ?? 1000;
-  return deps.withLock(async () => {
-    const deadline = deps.now() + opts.windowMs;
+  const deadline = deps.now() + opts.windowMs;
+  // #2750: the window used to be checked only BETWEEN batches, so one slow
+  // batch (sequential LLM calls) or a hung lock/count/write overran it without
+  // bound (observed window=120s → 282.5s). A real-time deadline signal now
+  // cancels (Postgres) or abandons (PGLite, cooperative) whatever is in
+  // flight; the injected clock still drives loop-boundary checks so the pure
+  // loop stays unit-testable.
+  const signal = anySignal(
+    AbortSignal.timeout(Math.max(1, opts.windowMs)),
+    opts.abortSignal,
+  );
+  const result: ExtractAtomsDrainResult = await deps.withLock(async () => {
     let extracted = 0;
     let skipped = 0;
     let batches = 0;
     let stopped: ExtractAtomsDrainResult['stopped'] = 'window';
 
-    while (deps.now() < deadline) {
+    while (deps.now() < deadline && !signal.aborted) {
       if (batches >= maxBatches) { stopped = 'max_batches'; break; }
 
-      const before = await deps.countRemaining();
+      let before: number | null;
+      try {
+        before = await deps.countRemaining(signal);
+      } catch (err) {
+        if (signal.aborted) break;
+        throw err;
+      }
       if (before === 0) { stopped = 'drained'; break; }
 
-      const r = await deps.runBatch();
+      // The backlog count consumed the same wallclock budget — re-check so a
+      // slow count can't hand the batch a window that already expired.
+      if (deps.now() >= deadline || signal.aborted) break;
+
+      let r: { extracted: number; skipped: number };
+      try {
+        r = await deps.runBatch(signal);
+      } catch (err) {
+        if (signal.aborted) break;
+        throw err;
+      }
       extracted += r.extracted;
       skipped += r.skipped;
       batches++;
       deps.onBatch?.({ batch: batches, extracted: r.extracted, remaining: before });
 
+      // A deadline abort inside the batch can surface as zero progress;
+      // window exhaustion wins over the generic no_progress label.
+      if (deps.now() >= deadline || signal.aborted) break;
+
       // Stop if a batch made zero forward progress — extraction is failing or
       // everything left is ineligible (e.g. all skipped). Prevents a hot loop
       // that spends budget without draining.
       if (r.extracted === 0 && r.skipped === 0) { stopped = 'no_progress'; break; }
     }
 
-    const remaining = await deps.countRemaining();
+    // After the window elapsed, don't spend more unbounded time on a final
+    // count — report remaining as unknown instead of overrunning further.
+    const windowElapsed = signal.aborted || deps.now() >= deadline;
+    let remaining: number | null = null;
+    if (!windowElapsed) {
+      try {
+        remaining = await deps.countRemaining(signal);
+      } catch (err) {
+        if (!signal.aborted) throw err;
+      }
+    }
     if (remaining === 0) stopped = 'drained';
     return { phase: 'extract_atoms', status: 'ok', extracted, skipped, remaining, batches, stopped };
-  });
+  }, signal);
+  // Internal window expiry is a normal partial result. An EXTERNAL abort
+  // (worker cancel/timeout/shutdown) must reject so Minion records the abort.
+  if (opts.abortSignal?.aborted) throw opts.abortSignal.reason;
+  return result;
 }
 
 // ─── Shared wiring helper (v0.42.x #1685 DECISION 5A) ──────────────────────
@@ -134,6 +184,8 @@ export interface DrainForSourceOpts {
   maxBatches?: number;
   /** Optional per-batch progress sink (stderr line in dream; job progress in the handler). */
   onBatch?: ExtractAtomsDrainDeps['onBatch'];
+  /** Worker cancellation / shutdown signal (Minion `job.signal`). */
+  abortSignal?: AbortSignal;
 }
 
 export async function runExtractAtomsDrainForSource(
@@ -149,12 +201,17 @@ export async function runExtractAtomsDrainForSource(
 
   return runExtractAtomsDrain(
     {
-      withLock: (work) => withRefreshingLock(engine, lockId, work, { ttlMinutes: 5 }),
-      runBatch: async () => {
+      withLock: (work, signal) => withRefreshingLock(engine, lockId, work, {
+        ttlMinutes: 5,
+        signal,
+        releaseTimeoutMs: LOCK_RELEASE_GRACE_MS,
+      }),
+      runBatch: async (signal) => {
         const r = await runPhaseExtractAtoms(engine, {
           sourceId: extractionSourceId,
           dryRun: false,
           brainDir: opts.brainDir,
+          abortSignal: signal,
         });
         const d = (r.details ?? {}) as Record<string, unknown>;
         return {
@@ -162,10 +219,14 @@ export async function runExtractAtomsDrainForSource(
           skipped: Number(d.duplicates_skipped ?? 0),
         };
       },
-      countRemaining: () => countExtractAtomsBacklog(engine, extractionSourceId),
+      countRemaining: (signal) => countExtractAtomsBacklog(engine, extractionSourceId, signal),
       now: Date.now,
       onBatch: opts.onBatch,
     },
-    { windowMs: opts.windowSeconds * 1000, maxBatches: opts.maxBatches },
+    {
+      windowMs: opts.windowSeconds * 1000,
+      maxBatches: opts.maxBatches,
+      abortSignal: opts.abortSignal,
+    },
   );
 }

src/core/cycle/extract-atoms.ts

@@ -58,6 +58,10 @@ import { createHash } from 'crypto';
 import { slugifySegment } from '../sync.ts';
 
 const DEFAULT_BUDGET_USD = 0.3;
+// #2750: fresh wallclock budget for the receipt/rollup bookkeeping writes when
+// the caller's deadline already fired — committed atoms must not lose their
+// cost/receipt trail, but the writes can't be unbounded either.
+const BOOKKEEPING_GRACE_MS = 5_000;
 
 // v0.42+ TODO: read atom_type enum from active pack manifest at runtime.
 const ATOM_TYPES = [
@@ -155,6 +159,13 @@ export interface ExtractAtomsOpts {
    * `heartbeat()` on the passed reporter.
    */
   progress?: ProgressReporter;
+  /**
+   * #2750: caller deadline/cancellation. Forwarded to every gateway call and
+   * DB query/write so the drain window bounds real lifetime, plus a
+   * cooperative between-item check (the PGLite path, where query abort only
+   * abandons the waiter).
+   */
+  abortSignal?: AbortSignal;
 }
 
 interface ExtractedAtom {
@@ -212,6 +223,7 @@ export async function discoverExtractablePages(
   engine: BrainEngine,
   sourceId: string,
   affectedSlugs?: string[],
+  abortSignal?: AbortSignal,
 ): Promise<DiscoveredPage[]> {
   const hasFilter = Array.isArray(affectedSlugs) && affectedSlugs.length > 0;
   const sql = `
@@ -251,13 +263,16 @@ export async function discoverExtractablePages(
       slug: string;
       compiled_truth: string;
       content_hash: string;
-    }>(sql, params);
+    }>(sql, params, { signal: abortSignal });
     return rows.map((r) => ({
       slug: r.slug,
       content: r.compiled_truth,
       contentHash: r.content_hash,
     }));
   } catch (err) {
+    // A deadline abort is not a fail-soft condition — propagate so the
+    // caller stops instead of proceeding with an empty page list.
+    if (abortSignal?.aborted) throw err;
     const msg = err instanceof Error ? err.message : String(err);
     console.error(`[extract_atoms] page-discovery query failed: ${msg}`);
     return []; // fail-soft: transcript path still proceeds
@@ -282,6 +297,7 @@ export async function discoverExtractablePages(
 export async function countExtractAtomsBacklog(
   engine: BrainEngine,
   sourceId?: string,
+  abortSignal?: AbortSignal,
 ): Promise<number | null> {
   try {
     // Two modes: scoped (the phase's per-source `remaining`) vs brain-wide
@@ -321,9 +337,10 @@ export async function countExtractAtomsBacklog(
     const params = scoped
       ? [sourceId, extractableTypes, MIN_PAGE_CHARS_FOR_EXTRACTION]
       : [extractableTypes, MIN_PAGE_CHARS_FOR_EXTRACTION];
-    const rows = await engine.executeRaw<{ cnt: string | number }>(sql, params);
+    const rows = await engine.executeRaw<{ cnt: string | number }>(sql, params, { signal: abortSignal });
     return Number(rows[0]?.cnt ?? 0);
   } catch (err) {
+    if (abortSignal?.aborted) throw err;
     const msg = err instanceof Error ? err.message : String(err);
     console.error(`[extract_atoms] backlog count failed: ${msg}`);
     return null;
@@ -350,6 +367,7 @@ export async function atomsExistingForHashes(
   engine: BrainEngine,
   sourceId: string,
   contentHash16s: string[],
+  abortSignal?: AbortSignal,
 ): Promise<Set<string>> {
   if (contentHash16s.length === 0) return new Set();
   try {
@@ -361,9 +379,11 @@ export async function atomsExistingForHashes(
           AND deleted_at IS NULL
           AND frontmatter->>'source_hash' = ANY($2::text[])`,
       [sourceId, contentHash16s],
+      { signal: abortSignal },
     );
     return new Set(rows.map(r => r.h));
   } catch (err) {
+    if (abortSignal?.aborted) throw err;
     const msg = err instanceof Error ? err.message : String(err);
     console.error(`[extract_atoms] batch idempotency check failed (assuming none extracted): ${msg}`);
     return new Set();
@@ -384,6 +404,7 @@ export async function runPhaseExtractAtoms(
 ): Promise<PhaseResult> {
   const sourceId = opts.sourceId ?? 'default';
   const chat = opts._chat ?? gatewayChat;
+  if (opts.abortSignal?.aborted) throw opts.abortSignal.reason;
 
   // 1a. Get transcripts (test seam OR production discovery).
   //     v0.41.2.1: config loader switched to loadConfigWithEngine() so the
@@ -425,7 +446,7 @@ export async function runPhaseExtractAtoms(
   if (opts._pages !== undefined) {
     pages = opts._pages;
   } else {
-    pages = await discoverExtractablePages(engine, sourceId, opts.affectedSlugs);
+    pages = await discoverExtractablePages(engine, sourceId, opts.affectedSlugs, opts.abortSignal);
   }
 
   // 2. Apply transcript-side source-hash idempotency in ONE batch query
@@ -437,7 +458,7 @@ export async function runPhaseExtractAtoms(
   // Surface a heartbeat before the batch query so even an instant
   // short-circuit shows a sign of life (closes Issue 2 silent-phase pain).
   opts.progress?.heartbeat(`checking existing atoms for ${allHashes16.length} transcripts`);
-  const existingHashes = await atomsExistingForHashes(engine, sourceId, allHashes16);
+  const existingHashes = await atomsExistingForHashes(engine, sourceId, allHashes16, opts.abortSignal);
   for (const t of transcripts) {
     if (existingHashes.has(t.contentHash.slice(0, 16))) {
       duplicatesSkipped++;
@@ -501,6 +522,7 @@ export async function runPhaseExtractAtoms(
   const failures: Array<{ source: string; error: string }> = [];
   let estimatedSpendUsd = 0;
   const budgetCap = DEFAULT_BUDGET_USD;
+  let deadlineAborted = false;
 
   // v0.41.19.0 (T3): throttled yield helper. Fires `opts.yieldDuringPhase`
   // every 30s. Cycle.ts threads `buildYieldDuringPhase(lock, outer)` so
@@ -526,6 +548,12 @@ export async function runPhaseExtractAtoms(
   }
 
   for (const item of work) {
+    // #2750: cooperative between-item abort. Works on every engine — this is
+    // the primary bound on PGLite, where query abort only abandons the waiter.
+    if (opts.abortSignal?.aborted) {
+      deadlineAborted = true;
+      break;
+    }
     await maybeYield();
     if (estimatedSpendUsd >= budgetCap) {
       if (item.kind === 'transcript') transcriptsSkipped++;
@@ -544,16 +572,22 @@ export async function runPhaseExtractAtoms(
           },
         ],
         maxTokens: 2000,
+        abortSignal: opts.abortSignal,
       });
+      // Rough cost estimate — Haiku at ~$0.80/M input + $4/M output.
+      // A completed gateway call is billable even if the deadline fires
+      // immediately afterward, so record usage BEFORE the abort check.
+      estimatedSpendUsd +=
+        (result.usage.input_tokens * 0.8 + result.usage.output_tokens * 4.0) / 1_000_000;
+      if (opts.abortSignal?.aborted) {
+        deadlineAborted = true;
+        break;
+      }
       // Post-await yield: closes the "long LLM call past TTL" hazard
       // codex flagged. The 30s throttle inside maybeYield bounds the
       // actual refresh rate so this is cheap when calls are fast.
       await maybeYield();
 
-      // Rough cost estimate — Haiku at ~$0.80/M input + $4/M output
-      estimatedSpendUsd +=
-        (result.usage.input_tokens * 0.8 + result.usage.output_tokens * 4.0) / 1_000_000;
-
       const atoms = parseAtomsResponse(result.text);
       if (atoms.length === 0) {
         if (item.kind === 'transcript') transcriptsProcessed++;
@@ -592,7 +626,7 @@ export async function runPhaseExtractAtoms(
               },
               timeline: '',
             },
-            { sourceId },
+            { sourceId, signal: opts.abortSignal },
           );
           totalAtomsExtracted++;
         }
@@ -605,6 +639,11 @@ export async function runPhaseExtractAtoms(
       // Reporter rate-limits to ~1 line/sec; safe to tick every iter.
       opts.progress?.tick(1, `${totalAtomsExtracted} atoms / ${duplicatesSkipped} skipped`);
     } catch (err) {
+      // A deadline abort is a partial result, not a per-item failure.
+      if (opts.abortSignal?.aborted) {
+        deadlineAborted = true;
+        break;
+      }
       failures.push({
         source: originLabel,
         error: err instanceof Error ? err.message : String(err),
@@ -615,6 +654,12 @@ export async function runPhaseExtractAtoms(
   // v0.42 Wave B2: write extract receipt + rollup row when the phase
   // actually extracted atoms. Both are best-effort per F-OUT-19 —
   // audit-trail / search-visibility surfaces don't block the phase result.
+  //
+  // #2750: bookkeeping runs on a FRESH short grace signal, never the caller's
+  // work deadline — the deadline may have already fired (partial run) and
+  // committed atoms must not lose their receipt/cost trail; but the writes
+  // stay bounded so the overrun is capped at the grace window.
+  const bookkeepingSignal = opts.dryRun ? undefined : AbortSignal.timeout(BOOKKEEPING_GRACE_MS);
   if (!opts.dryRun && totalAtomsExtracted > 0) {
     const runId = `atoms-${Date.now().toString(36)}-${sourceId.slice(0, 4)}`;
     try {
@@ -629,19 +674,24 @@ export async function runPhaseExtractAtoms(
         summary:
           `Extracted ${totalAtomsExtracted} atoms from ` +
           `${transcriptsProcessed} transcripts + ${pagesProcessed} pages.`,
-      });
+      }, { signal: bookkeepingSignal });
     } catch (err) {
       console.error(`[extract_atoms] receipt write failed: ${(err as Error).message}`);
     }
   }
   if (!opts.dryRun) {
-    await upsertExtractRollup(engine, {
-      kind: 'atoms',
-      source_id: sourceId,
-      cost_delta: estimatedSpendUsd,
-      round_completed_delta: failures.length === 0 ? 1 : 0,
-      halt_delta: failures.length > 0 ? 1 : 0,
-    });
+    try {
+      await upsertExtractRollup(engine, {
+        kind: 'atoms',
+        source_id: sourceId,
+        cost_delta: estimatedSpendUsd,
+        // A deadline-truncated run is not a completed round.
+        round_completed_delta: failures.length === 0 && !deadlineAborted ? 1 : 0,
+        halt_delta: failures.length > 0 ? 1 : 0,
+      }, { signal: bookkeepingSignal });
+    } catch (err) {
+      console.error(`[extract_atoms] rollup write failed: ${(err as Error).message}`);
+    }
   }
 
   return {
@@ -670,6 +720,7 @@ export async function runPhaseExtractAtoms(
       budget_usd: budgetCap,
       source_id: sourceId,
       dry_run: opts.dryRun ?? false,
+      deadline_aborted: deadlineAborted,
     },
   };
 }

src/core/cycle/synthesize.ts

@@ -428,13 +428,8 @@ export async function runPhaseSynthesize(
 
     const queue = new MinionQueue(engine);
     const childIds: number[] = [];
-    /**
-     * Map child job_id → transcript metadata. Drives D6 orchestrator-side
-     * slug rewrite for chunked transcripts AND the deterministic frontmatter
-     * stampDreamProvenance merges into each written page. Populated for
-     * every child (single-chunk children carry chunkTotal=1).
-     */
-    const childMeta = new Map<number, ChildMeta>();
+    /** Map child job_id → chunk metadata for D6 orchestrator-side slug rewrite. */
+    const chunkInfo = new Map<number, { idx: number; hash6: string }>();
     /** Skip reasons for the cycle report (D5 cap hits, D8 legacy-key skips). */
     const skipReports: Array<{ filePath: string; reason: string }> = [];
 
@@ -518,14 +513,9 @@ export async function runPhaseSynthesize(
           { allowProtectedSubmit: true },
         );
         childIds.push(child.id);
-        childMeta.set(child.id, {
-          idx: i,
-          hash6,
-          chunkTotal: chunks.length,
-          transcriptSource: t.transcriptSource,
-          transcriptId: stripContentVersionSuffix(t.basename),
-          inferredDate: t.inferredDate,
-        });
+        if (isChunked) {
+          chunkInfo.set(child.id, { idx: i, hash6 });
+        }
       }
     }
 
@@ -554,14 +544,14 @@ export async function runPhaseSynthesize(
 
     // Collect slugs from put_page tool executions across the children
     // (codex finding #2: deterministic provenance, NOT pages.updated_at).
-    // D6 orchestrator slug rewrite: childMeta drives post-hoc rewrite of
+    // D6 orchestrator slug rewrite: chunkInfo drives post-hoc rewrite of
     // bare-hash slugs to `<hash6>-c<idx>` so chunked siblings can't collide
     // even if Sonnet drops the chunk suffix.
     // v0.32.8: refs carry source_id so reverseWriteRefs picks the correct
     // (source, slug) row. #1586: refs are stamped with the cycle's resolved
     // source (children write there via SubagentHandlerData.source_id).
     const cycleSourceId = opts.sourceId ?? 'default';
-    const writtenRefs = await collectChildPutPageSlugs(engine, childIds, childMeta, cycleSourceId);
+    const writtenRefs = await collectChildPutPageSlugs(engine, childIds, chunkInfo, cycleSourceId);
 
     const summaryDate = opts.date ?? today();
 
@@ -569,12 +559,7 @@ export async function runPhaseSynthesize(
     // of every child-written page BEFORE reverse-rendering, so generated pages
     // are queryable (`frontmatter->>'dream_generated'`) and a later put_page
     // write-through (which re-renders from the DB row) can't erase the stamp.
-    // #2285: the stamp also carries the orchestrator-owned deterministic
-    // frontmatter (transcript_id, transcript_source, transcript_hash, date,
-    // chunk) derived from childMeta — subagent drift on those fields can't
-    // leak, and reverseWriteRefs below re-reads the row so the same fields
-    // land in the on-disk markdown.
-    await stampDreamProvenance(engine, writtenRefs, summaryDate, childMeta);
+    await stampDreamProvenance(engine, writtenRefs, summaryDate);
 
     // Dual-write: reverse-render each DB row → markdown file.
     const reverseWriteCount = await reverseWriteRefs(engine, opts.brainDir, writtenRefs, cycleSourceId);
@@ -1110,17 +1095,15 @@ function sanitizeForSlug(s: string): string {
  * fake"): we no longer need detection because the rewrite enforces
  * uniqueness at slug-write time.
  *
- * `childMeta` maps child job_id → per-child transcript metadata. Chunked
- * children (chunkTotal > 1) get the slug rewrite; single-chunk children
- * pass through unchanged. Each returned ref carries the job_id that wrote
- * it so stampDreamProvenance can pair the slug back to its childMeta entry.
+ * `chunkInfo` maps child job_id → { chunk_index, hash6 }. Single-chunk
+ * children are absent from the map and pass through unchanged.
  */
 async function collectChildPutPageSlugs(
   engine: BrainEngine,
   childIds: number[],
-  childMeta: Map<number, ChildMeta>,
+  chunkInfo: Map<number, { idx: number; hash6: string }>,
   sourceId = 'default',
-): Promise<Array<{ slug: string; source_id: string; jobId: number }>> {
+): Promise<Array<{ slug: string; source_id: string }>> {
   if (childIds.length === 0) return [];
   // Raw fetch — NO SELECT DISTINCT. Preserves per-child slug duplicates so
   // the orchestrator sees what each child wrote. COALESCE handles both
@@ -1139,73 +1122,16 @@ async function collectChildPutPageSlugs(
        FROM subagent_tool_executions
       WHERE job_id = ANY($1::int[])
         AND tool_name = 'brain_put_page'
-        AND status = 'complete'
-      ORDER BY id`,
+        AND status = 'complete'`,
     [childIds],
   );
-  const rewritten = new Map<string, number>();
+  const rewritten = new Set<string>();
   for (const r of rows) {
     if (typeof r.slug !== 'string' || r.slug.length === 0) continue;
-    const meta = childMeta.get(r.job_id);
-    const finalSlug = meta && meta.chunkTotal > 1
-      ? rewriteChunkedSlug(r.slug, meta.hash6, meta.idx)
-      : r.slug;
-    // Last writer wins, in execution-row order (ORDER BY id): if two children
-    // collide on a final slug, the pages row holds the LAST put_page write, so
-    // the stamp must attribute that child's transcript — not an arbitrary one.
-    rewritten.set(finalSlug, r.job_id);
+    const ci = chunkInfo.get(r.job_id);
+    rewritten.add(ci ? rewriteChunkedSlug(r.slug, ci.hash6, ci.idx) : r.slug);
   }
-  return [...rewritten.entries()]
-    .sort(([a], [b]) => a.localeCompare(b))
-    .map(([slug, jobId]) => ({ slug, source_id: sourceId, jobId }));
-}
-
-/**
- * Per-child orchestrator state. Drives D6 chunked-slug rewrite (idx + hash6)
- * AND the deterministic frontmatter stampDreamProvenance merges into each
- * written page. Populated for every child, not just chunked ones.
- */
-interface ChildMeta {
-  idx: number;
-  hash6: string;
-  chunkTotal: number;
-  transcriptSource: string | null;
-  transcriptId: string;
-  inferredDate: string | null;
-}
-
-/**
- * Strip the content-version suffix that claude-code-archive appends when a
- * conversation is edited (`<uuid>--<contentHash>.md`). The session UUID is
- * the stable transcript identifier; the suffix changes with content. Used to
- * populate `transcript_id` so edits of the same session collapse to one id.
- */
-function stripContentVersionSuffix(basename: string): string {
-  return basename.replace(/--[a-f0-9]+$/i, '');
-}
-
-/**
- * Deterministic frontmatter for one synthesized page (#2285). Every field
- * here is owned by the orchestrator — the subagent's value for any of these
- * is overwritten. The subagent retains authority over type / title / tags /
- * body. `date` feeds the effective-date precedence chain
- * (src/core/effective-date.ts) so re-imports keep the conversation date even
- * when sync tools re-stamp file mtimes.
- */
-function buildDeterministicFrontmatter(
-  meta: ChildMeta,
-  cycleDate: string,
-): Record<string, unknown> {
-  const overrides: Record<string, unknown> = {
-    dream_generated: true,
-    dream_cycle_date: cycleDate,
-    transcript_id: meta.transcriptId,
-    transcript_hash: meta.hash6,
-  };
-  if (meta.transcriptSource) overrides.transcript_source = meta.transcriptSource;
-  if (meta.chunkTotal > 1) overrides.chunk = `${meta.idx + 1}/${meta.chunkTotal}`;
-  if (meta.inferredDate) overrides.date = meta.inferredDate;
-  return overrides;
+  return Array.from(rewritten).sort().map(slug => ({ slug, source_id: sourceId }));
 }
 
 /**
@@ -1251,19 +1177,12 @@ async function hasLegacySingleChunkCompletion(
  */
 async function stampDreamProvenance(
   engine: BrainEngine,
-  refs: Array<{ slug: string; source_id: string; jobId?: number }>,
+  refs: Array<{ slug: string; source_id: string }>,
   cycleDate: string,
-  childMeta?: Map<number, ChildMeta>,
 ): Promise<void> {
   if (refs.length === 0) return;
   const { executeRawJsonb } = await import('../sql-query.ts');
-  for (const { slug, source_id, jobId } of refs) {
-    // #2285: when the ref pairs back to a child, the stamp also carries the
-    // orchestrator-owned deterministic frontmatter for that transcript.
-    const meta = jobId !== undefined ? childMeta?.get(jobId) : undefined;
-    const stamp = meta
-      ? buildDeterministicFrontmatter(meta, cycleDate)
-      : { dream_generated: true, dream_cycle_date: cycleDate };
+  for (const { slug, source_id } of refs) {
     try {
       await executeRawJsonb(
         engine,
@@ -1271,7 +1190,7 @@ async function stampDreamProvenance(
             SET frontmatter = COALESCE(frontmatter, '{}'::jsonb) || $3::jsonb
           WHERE slug = $1 AND source_id = $2`,
         [slug, source_id],
-        [stamp],
+        [{ dream_generated: true, dream_cycle_date: cycleDate }],
       );
     } catch (e) {
       const msg = e instanceof Error ? e.message : String(e);

src/core/cycle/transcript-discovery.ts

@@ -10,7 +10,7 @@
  */
 
 import { readFileSync, readdirSync, statSync } from 'node:fs';
-import { join, basename, dirname } from 'node:path';
+import { join, basename } from 'node:path';
 import { createHash } from 'node:crypto';
 import { pruneDir } from '../sync.ts';
 
@@ -23,22 +23,8 @@ export interface DiscoveredTranscript {
   content: string;
   /** Filename basename without extension; used as a topic-slug seed. */
   basename: string;
-  /**
-   * Inferred conversation date (YYYY-MM-DD) or null. Precedence: the
-   * `| First message | <ISO> |` row in the transcript's `## Metadata`
-   * table (stable across mtime-restamping re-syncs) wins; a leading
-   * `YYYY-MM-DD` in the basename is the fallback.
-   */
+  /** Inferred date if the basename matches `YYYY-MM-DD...` (or null). */
   inferredDate: string | null;
-  /**
-   * Transcript source archive name, derived from the path's grandparent
-   * directory (the immediate parent of the date directory). For the
-   * canonical layout `<corpus>/<source>/<date>/<id>.md` this yields the
-   * source-name segment — e.g. `claude-code` for the claude-code-archive
-   * output, `meetings` for meeting recordings. Null when the file does
-   * not live under a `<source>/<date>/` pair (ad-hoc inputs).
-   */
-  transcriptSource: string | null;
 }
 
 export interface DiscoverOpts {
@@ -175,36 +161,6 @@ function matchesAnyExclude(text: string, patterns: RegExp[]): boolean {
   return false;
 }
 
-/**
- * Content-based conversation date: the `| First message | <ISO timestamp> |`
- * row claude-code-archive writes into the transcript's `## Metadata` table.
- * Stable across rsync/Dropbox/Syncthing/B2 re-syncs that re-stamp mtime,
- * unlike anything derived from file metadata. Returns YYYY-MM-DD or null.
- */
-const FIRST_MESSAGE_RE = /^\|\s*First message\s*\|\s*(\d{4}-\d{2}-\d{2})/im;
-
-export function inferContentDate(content: string): string | null {
-  const m = FIRST_MESSAGE_RE.exec(content);
-  return m ? m[1] : null;
-}
-
-/**
- * Derive the archive source name from a transcript path. Returns the basename
- * of the directory two levels above the file when the immediate parent is a
- * date directory and the grandparent looks like a source-name slug (lowercase
- * alphanumeric segments separated by hyphens); otherwise null. This pins the
- * canonical claude-code-archive layout `<corpus>/<source>/<date>/<id>.md`
- * without claiming a source for ad-hoc inputs that don't match.
- */
-export function deriveTranscriptSource(filePath: string): string | null {
-  const parentName = basename(dirname(filePath));
-  if (!/^\d{4}-\d{2}-\d{2}/.test(parentName)) return null;
-  const grandparentName = basename(dirname(dirname(filePath)));
-  if (!grandparentName) return null;
-  if (!/^[a-z0-9]+(-[a-z0-9]+)*$/.test(grandparentName)) return null;
-  return grandparentName;
-}
-
 function listTextFiles(dir: string): string[] {
   // Recursive walk with descent-time pruning (closes codex C12/C13 spec gap).
   // Accepts BOTH .txt and .md per transcript-discovery's domain rules — does
@@ -269,11 +225,8 @@ export function discoverTranscripts(opts: DiscoverOpts): DiscoveredTranscript[]
       const ext = filePath.endsWith('.md') ? '.md' : '.txt';
       const baseName = basename(filePath, ext);
       const dateMatch = DATE_RE.exec(baseName);
-      const filenameDate = dateMatch ? dateMatch[1] : null;
-      // Fast path: date-named files outside the window skip before the read.
-      // ponytail: a date-named file whose content date differs is filtered on
-      // its filename date — acceptable; archive layouts use UUID basenames.
-      if (filenameDate && !isInDateRange(filenameDate, opts)) continue;
+      const inferredDate = dateMatch ? dateMatch[1] : null;
+      if (!isInDateRange(inferredDate, opts)) continue;
 
       let content: string;
       try {
@@ -288,17 +241,12 @@ export function discoverTranscripts(opts: DiscoverOpts): DiscoveredTranscript[]
       }
       if (matchesAnyExclude(content, excludeRes)) continue;
 
-      // Content-metadata date wins (survives mtime restamps); filename next.
-      const inferredDate = inferContentDate(content) ?? filenameDate;
-      if (!isInDateRange(inferredDate, opts)) continue;
-
       results.push({
         filePath,
         contentHash: hashContent(content),
         content,
         basename: baseName,
         inferredDate,
-        transcriptSource: deriveTranscriptSource(filePath),
       });
     }
   }
@@ -342,7 +290,6 @@ export function readSingleTranscript(
     contentHash: hashContent(content),
     content,
     basename: baseName,
-    inferredDate: inferContentDate(content) ?? (dateMatch ? dateMatch[1] : null),
-    transcriptSource: deriveTranscriptSource(filePath),
+    inferredDate: dateMatch ? dateMatch[1] : null,
   };
 }

src/core/db-lock.ts

@@ -26,7 +26,8 @@ import type { BrainEngine } from './engine.ts';
 
 export interface DbLockHandle {
   id: string;
-  release: () => Promise<void>;
+  /** Optional signal bounds the release DELETE (deadline-bound callers). */
+  release: (signal?: AbortSignal) => Promise<void>;
   refresh: () => Promise<void>;
 }
 
@@ -173,6 +174,7 @@ export async function tryAcquireDbLock(
   engine: BrainEngine,
   lockId: string,
   ttlMinutes: number = DEFAULT_TTL_MINUTES,
+  opts: { signal?: AbortSignal } = {},
 ): Promise<DbLockHandle | null> {
   const pid = process.pid;
   const host = hostname();
@@ -205,20 +207,26 @@ export async function tryAcquireDbLock(
     // `gbrain sync --break-lock --max-age <s>` uses last_refreshed_at (not
     // acquired_at) to identify wedged-but-alive holders without stealing
     // healthy long-running holders that are actively refreshing.
-    const rows: Array<{ id: string }> = await sql`
-      INSERT INTO gbrain_cycle_locks (id, holder_pid, holder_host, acquired_at, ttl_expires_at, last_refreshed_at)
-      VALUES (${lockId}, ${pid}, ${host}, NOW(), NOW() + ${ttl}::interval, NOW())
-      ON CONFLICT (id) DO UPDATE
-        SET holder_pid = ${pid},
-            holder_host = ${host},
-            acquired_at = NOW(),
-            ttl_expires_at = NOW() + ${ttl}::interval,
-            last_refreshed_at = NOW()
-        WHERE gbrain_cycle_locks.ttl_expires_at < NOW()
-          AND (gbrain_cycle_locks.last_refreshed_at IS NULL
-               OR gbrain_cycle_locks.last_refreshed_at < NOW() - ${stealGraceSeconds} * INTERVAL '1 second')
-      RETURNING id
-    `;
+    // #2750: routed through executeRaw so a deadline-bound caller's signal
+    // can cancel a hung acquire (pool exhaustion). Cancellation is
+    // transactional; in the rare ambiguous-commit case the row's TTL is the
+    // backstop (drain locks use a short 5-minute TTL).
+    const rows = await engine.executeRaw<{ id: string }>(
+      `INSERT INTO gbrain_cycle_locks (id, holder_pid, holder_host, acquired_at, ttl_expires_at, last_refreshed_at)
+       VALUES ($1, $2, $3, NOW(), NOW() + $4::interval, NOW())
+       ON CONFLICT (id) DO UPDATE
+         SET holder_pid = $2,
+             holder_host = $3,
+             acquired_at = NOW(),
+             ttl_expires_at = NOW() + $4::interval,
+             last_refreshed_at = NOW()
+         WHERE gbrain_cycle_locks.ttl_expires_at < NOW()
+           AND (gbrain_cycle_locks.last_refreshed_at IS NULL
+                OR gbrain_cycle_locks.last_refreshed_at < NOW() - $5 * INTERVAL '1 second')
+       RETURNING id`,
+      [lockId, pid, host, ttl, stealGraceSeconds],
+      { signal: opts.signal },
+    );
     if (rows.length === 0) return null;
     const deregister = registerCleanup(`db-lock:${lockId}`, async () => {
       await sql`
@@ -241,12 +249,17 @@ export async function tryAcquireDbLock(
           [ttl, lockId, pid],
         );
       },
-      release: async () => {
+      release: async (signal?: AbortSignal) => {
         deregister();
-        await sql`
-          DELETE FROM gbrain_cycle_locks
-          WHERE id = ${lockId} AND holder_pid = ${pid}
-        `;
+        // Direct session pool (same rationale as refresh, #1794) + optional
+        // signal so a deadline-bound caller's release can't hang forever on
+        // an exhausted pooler. TTL is the backstop if the DELETE is cancelled.
+        await engine.executeRawDirect(
+          `DELETE FROM gbrain_cycle_locks
+            WHERE id = $1 AND holder_pid = $2`,
+          [lockId, pid],
+          { signal },
+        );
       },
     };
   }
@@ -303,6 +316,11 @@ export async function tryAcquireDbLock(
   const first = await acquireOnce();
   if (first) return first;
 
+  // #2750: deadline-bound callers prefer an honest busy result over the
+  // best-effort same-host takeover below, whose inspect/delete/retry calls
+  // are not signal-bounded. The initial upsert already reclaims expired locks.
+  if (opts.signal) return null;
+
   // v0.42 (#1780 Gap 3): the lock is held and its TTL hasn't expired (the
   // upsert's ON CONFLICT ... WHERE ttl_expires_at < NOW() returned no row).
   // If the holder is on THIS host, provably dead, and past the grace window,
@@ -796,6 +814,10 @@ export interface WithRefreshingLockOpts {
   ttlMinutes?: number;
   /** Heartbeat-fail threshold in ms — abort if SELECT 1 takes longer. Default 30000. */
   heartbeatTimeoutMs?: number;
+  /** #2750: bound lock acquisition with the caller's deadline signal. */
+  signal?: AbortSignal;
+  /** Fresh cleanup budget for the release DELETE when `signal` is set. Default 5000. */
+  releaseTimeoutMs?: number;
 }
 
 /**
@@ -815,7 +837,7 @@ export async function withRefreshingLock<T>(
   // Refresh 6x per TTL window so a missed tick doesn't expire the lock.
   const refreshIntervalMs = Math.max(15000, (ttlMinutes * 60 * 1000) / 6);
 
-  const handle = await tryAcquireDbLock(engine, lockId, ttlMinutes);
+  const handle = await tryAcquireDbLock(engine, lockId, ttlMinutes, { signal: opts.signal });
   if (!handle) throw new LockUnavailableError(lockId);
 
   let healthOk = true;
@@ -854,7 +876,13 @@ export async function withRefreshingLock<T>(
     return await work();
   } finally {
     clearInterval(interval);
-    try { await handle.release(); } catch { /* idempotent */ }
+    // #2750: when the caller is deadline-bound, its work signal may already
+    // have fired — release on a FRESH short grace signal so cleanup neither
+    // inherits the spent deadline nor hangs unbounded. TTL is the backstop.
+    const releaseSignal = opts.signal
+      ? AbortSignal.timeout(opts.releaseTimeoutMs ?? 5_000)
+      : undefined;
+    try { await handle.release(releaseSignal); } catch { /* idempotent; TTL backstop */ }
     if (!healthOk) {
       // Surface that the heartbeat detected backend trouble — caller can
       // log to the connection-events audit if desired.

src/core/engine.ts

@@ -696,8 +696,16 @@ export interface BrainEngine {
    * is included in the INSERT column list so ON CONFLICT (source_id, slug)
    * DO UPDATE actually targets the intended row instead of fabricating a
    * duplicate at (default, slug). Multi-source brains MUST pass sourceId.
+   *
+   * `opts.signal` (#2750): optional cancellation for deadline-bound writers.
+   * Postgres cancels the in-flight statement; PGLite pre-checks only (query
+   * cancellation is not possible in-process — cooperative abort between calls).
    */
-  putPage(slug: string, page: PageInput, opts?: { sourceId?: string }): Promise<Page>;
+  putPage(
+    slug: string,
+    page: PageInput,
+    opts?: { sourceId?: string; signal?: AbortSignal },
+  ): Promise<Page>;
   /**
    * v0.41.13 (#1309) — identity-based dedup pre-check for the import pipeline.
    *

src/core/extract/receipt-writer.ts

@@ -187,6 +187,7 @@ function buildReceiptFrontmatter(input: ExtractReceiptInput): Record<string, unk
 export async function writeReceipt(
   engine: BrainEngine,
   input: ExtractReceiptInput,
+  opts?: { signal?: AbortSignal },
 ): Promise<{ slug: string; page: Page }> {
   const slug = receiptSlug(input);
   const title = `${input.kind} — ${input.round} — ${input.source_id}`;
@@ -201,7 +202,7 @@ export async function writeReceipt(
       compiled_truth,
       frontmatter,
     },
-    { sourceId: input.source_id },
+    { sourceId: input.source_id, signal: opts?.signal },
   );
 
   return { slug, page };

src/core/extract/rollup-writer.ts

@@ -70,6 +70,7 @@ function today(): string {
 export async function upsertExtractRollup(
   engine: BrainEngine,
   input: RollupUpsertInput,
+  opts?: { signal?: AbortSignal },
 ): Promise<{ ok: boolean; error?: string }> {
   const day = input.day ?? today();
   const cost = input.cost_delta ?? 0;
@@ -96,9 +97,12 @@ export async function upsertExtractRollup(
          rollup_write_failures  = extract_rollup_7d.rollup_write_failures  + EXCLUDED.rollup_write_failures,
          updated_at             = now()`,
       [input.kind, input.source_id, day, cost, halts, evalFails, evalPasses, completed, failures],
+      { signal: opts?.signal },
     );
     return { ok: true };
   } catch (err) {
+    // Signal-bounded callers get the abort surfaced, not a swallowed `ok:false`.
+    if (opts?.signal?.aborted) throw err;
     const msg = (err as Error).message || String(err);
     // Don't spam: log once per process per (kind, day) error class.
     rollupErrorLogOnce(input.kind, day, msg);

src/core/pglite-engine.ts

@@ -1003,7 +1003,15 @@ export class PGLiteEngine implements BrainEngine {
     return { slug: r.slug, id: Number(r.id) };
   }
 
-  async putPage(slug: string, page: PageInput, opts?: { sourceId?: string }): Promise<Page> {
+  async putPage(
+    slug: string,
+    page: PageInput,
+    opts?: { sourceId?: string; signal?: AbortSignal },
+  ): Promise<Page> {
+    // #2750: PGLite is in-process WASM — no query cancellation. Pre-check so
+    // an already-fired deadline skips the write; abort is cooperative
+    // between calls (same posture as executeRaw's documented gap).
+    if (opts?.signal?.aborted) throw new DOMException('aborted', 'AbortError');
     slug = validateSlug(slug);
     const hash = page.content_hash || contentHash(page);
     const frontmatter = page.frontmatter || {};

src/core/postgres-engine.ts

@@ -72,6 +72,32 @@ function escapeSqlStringLiteral(value: string): string {
   return value.replace(/'/g, "''");
 }
 
+/**
+ * #2750: race a promise against an AbortSignal, detaching the listener once
+ * settled (long-lived drain signals are reused across many calls, so a bare
+ * Promise.race would leak one listener per call). The abandoned promise keeps
+ * running; used only for pool-acquisition waits where that is harmless.
+ */
+function waitForSignal<T>(work: Promise<T>, signal?: AbortSignal): Promise<T> {
+  if (!signal) return work;
+  if (signal.aborted) return Promise.reject(new DOMException('aborted', 'AbortError'));
+  return new Promise<T>((resolve, reject) => {
+    let settled = false;
+    const finish = (fn: () => void) => {
+      if (settled) return;
+      settled = true;
+      signal.removeEventListener('abort', onAbort);
+      fn();
+    };
+    const onAbort = () => finish(() => reject(new DOMException('aborted', 'AbortError')));
+    signal.addEventListener('abort', onAbort, { once: true });
+    work.then(
+      (value) => finish(() => resolve(value)),
+      (err) => finish(() => reject(err)),
+    );
+  });
+}
+
 export function getPostgresSchema(
   dims: number = DEFAULT_EMBEDDING_DIMENSIONS,
   model: string = DEFAULT_EMBEDDING_MODEL,
@@ -1061,7 +1087,12 @@ export class PostgresEngine implements BrainEngine {
     });
   }
 
-  async putPage(slug: string, page: PageInput, opts?: { sourceId?: string }): Promise<Page> {
+  async putPage(
+    slug: string,
+    page: PageInput,
+    opts?: { sourceId?: string; signal?: AbortSignal },
+  ): Promise<Page> {
+    if (opts?.signal?.aborted) throw new DOMException('aborted', 'AbortError');
     slug = validateSlug(slug);
     const sql = this.sql;
     const hash = page.content_hash || contentHash(page);
@@ -1096,7 +1127,7 @@ export class PostgresEngine implements BrainEngine {
     const sourceUri = page.source_uri ?? null;
     const ingestedVia = page.ingested_via ?? null;
     const ingestedAt = (sourceKind || sourceUri || ingestedVia) ? new Date() : null;
-    const rows = await sql`
+    const pending = sql`
       INSERT INTO pages (source_id, slug, type, page_kind, title, compiled_truth, timeline, frontmatter, content_hash, updated_at, effective_date, effective_date_source, import_filename, chunker_version, source_path, source_kind, source_uri, ingested_via, ingested_at)
       VALUES (${sourceId}, ${slug}, ${page.type}, ${pageKind}, ${page.title}, ${page.compiled_truth}, ${page.timeline || ''}, ${sql.json(frontmatter as Parameters<typeof sql.json>[0])}, ${hash}, now(), ${effectiveDate}, ${effectiveDateSource}, ${importFilename}, COALESCE(${chunkerVersion}::smallint, ${MARKDOWN_CHUNKER_VERSION}), ${sourcePath}, ${sourceKind}, ${sourceUri}, ${ingestedVia}, ${ingestedAt})
       ON CONFLICT (source_id, slug) DO UPDATE SET
@@ -1119,6 +1150,22 @@ export class PostgresEngine implements BrainEngine {
         ingested_at           = COALESCE(EXCLUDED.ingested_at,           pages.ingested_at)
       RETURNING id, source_id, slug, type, title, compiled_truth, timeline, frontmatter, content_hash, created_at, updated_at, effective_date, effective_date_source, import_filename, source_kind, source_uri, ingested_via, ingested_at
     `;
+    // #2750: cancel the in-flight statement when the caller's deadline fires,
+    // same .cancel() wiring as runUnsafe (postgres.js pending queries).
+    if (opts?.signal) {
+      const signal = opts.signal;
+      const onAbort = () => {
+        try { (pending as unknown as { cancel?: () => void }).cancel?.(); } catch { /* best-effort */ }
+      };
+      signal.addEventListener('abort', onAbort, { once: true });
+      try {
+        const rows = await pending;
+        return rowToPage(rows[0]);
+      } finally {
+        signal.removeEventListener('abort', onAbort);
+      }
+    }
+    const rows = await pending;
     return rowToPage(rows[0]);
   }
 
@@ -5807,11 +5854,16 @@ export class PostgresEngine implements BrainEngine {
     params?: unknown[],
     opts?: { signal?: AbortSignal },
   ): Promise<T[]> {
+    // #2750: an already-fired signal short-circuits BEFORE any pool routing,
+    // and the direct-pool acquisition itself is signal-bounded — under pooler
+    // exhaustion `ddl()` can stall indefinitely, which used to make even a
+    // "bounded" lock release hang past its caller's deadline.
+    if (opts?.signal?.aborted) throw new DOMException('aborted', 'AbortError');
     // Inside an open transaction, _sql is the reserved tx connection (set via
     // defineProperty in transaction()); never reroute off it.
     const inTransaction = this._sql !== null && this.connectionManager?.peekReadPool() !== this._sql;
     const conn = (!inTransaction && this.connectionManager?.isDualPoolActive())
-      ? await this.connectionManager.ddl()
+      ? await waitForSignal(this.connectionManager.ddl(), opts?.signal)
       : this.sql;
     return this.runUnsafe<T>(conn, sql, params, opts);
   }

test/cycle-dream-output-root.test.ts

@@ -26,7 +26,6 @@ const transcript: DiscoveredTranscript = {
   content: 'User: hello world',
   contentHash: 'abcdef0123456789',
   inferredDate: '2026-07-17',
-  transcriptSource: null,
 } as DiscoveredTranscript;
 
 describe('#2415: buildSynthesisPrompt output root', () => {

test/cycle-synthesize-slug-collection.test.ts

@@ -152,94 +152,3 @@ describe('#2569: stampDreamProvenance persists the marker into DB frontmatter',
     await stampDreamProvenance(engine as any, refs, '2026-07-17'); // idempotent
   });
 });
-
-describe('#2285: orchestrator-owned deterministic transcript frontmatter', () => {
-  const meta = {
-    idx: 1,
-    hash6: 'abc123',
-    chunkTotal: 3,
-    transcriptSource: 'claude-code',
-    transcriptId: 'session-uuid',
-    inferredDate: '2026-05-15',
-  };
-
-  test('collectChildPutPageSlugs pairs each ref back to the writing job', async () => {
-    const refs = await collectChildPutPageSlugs(
-      engine as any, [1001], new Map([[1001, { ...meta, chunkTotal: 1 }]]), 'mybrain',
-    );
-    expect(refs.length).toBeGreaterThan(0);
-    for (const r of refs) {
-      expect(r.jobId).toBe(1001);
-      expect(r.source_id).toBe('mybrain'); // #1586: cycle source, never hardcoded 'default'
-    }
-  });
-
-  test('slug collision across children attributes the LAST writer (matches surviving putPage)', async () => {
-    const db = (engine as any).db;
-    // Jobs 1001 then 1002 write the same slug; the pages row would hold
-    // 1002's content (last put_page wins), so the ref must carry jobId 1002.
-    await db.query(
-      `INSERT INTO subagent_tool_executions (job_id, message_idx, tool_use_id, tool_name, status, input)
-       VALUES (1001, 9, 'tool_dup_a', 'brain_put_page', 'complete', $1::jsonb)`,
-      [JSON.stringify({ slug: 'wiki/agents/test/collision', body: 'first' })],
-    );
-    await db.query(
-      `INSERT INTO subagent_tool_executions (job_id, message_idx, tool_use_id, tool_name, status, input)
-       VALUES (1002, 9, 'tool_dup_b', 'brain_put_page', 'complete', $1::jsonb)`,
-      [JSON.stringify({ slug: 'wiki/agents/test/collision', body: 'second' })],
-    );
-    const refs = await collectChildPutPageSlugs(engine as any, [1001, 1002], new Map());
-    const hit = refs.find((r: { slug: string }) => r.slug === 'wiki/agents/test/collision');
-    expect(hit?.jobId).toBe(1002);
-  });
-
-  test('stampDreamProvenance merges the transcript metadata into DB frontmatter', async () => {
-    const slug = 'wiki/originals/ideas/2026-07-17-transcript-meta-abc123';
-    await engine.putPage(slug, {
-      type: 'note',
-      title: 'Meta stamp',
-      compiled_truth: 'body',
-      timeline: '',
-      frontmatter: { keep_me: 'yes', transcript_id: 'subagent-drift' },
-    });
-    await stampDreamProvenance(
-      engine as any,
-      [{ slug, source_id: 'default', jobId: 42 }],
-      '2026-07-17',
-      new Map([[42, meta]]),
-    );
-    const rows = await engine.executeRaw<{ fm: Record<string, unknown> }>(
-      `SELECT frontmatter AS fm FROM pages WHERE slug = $1`, [slug],
-    );
-    const fm = rows[0].fm as Record<string, unknown>;
-    expect(fm.dream_generated).toBe(true);
-    expect(fm.dream_cycle_date).toBe('2026-07-17');
-    expect(fm.transcript_id).toBe('session-uuid'); // orchestrator wins over subagent drift
-    expect(fm.transcript_hash).toBe('abc123');
-    expect(fm.transcript_source).toBe('claude-code');
-    expect(fm.chunk).toBe('2/3');
-    expect(fm.date).toBe('2026-05-15');
-    expect(fm.keep_me).toBe('yes'); // subagent-owned keys survive
-  });
-
-  test('single-chunk children with no inferredDate stamp only the applicable fields', async () => {
-    const slug = 'wiki/originals/ideas/2026-07-17-minimal-meta-abc123';
-    await engine.putPage(slug, {
-      type: 'note', title: 'Minimal', compiled_truth: 'b', timeline: '', frontmatter: {},
-    });
-    await stampDreamProvenance(
-      engine as any,
-      [{ slug, source_id: 'default', jobId: 43 }],
-      '2026-07-17',
-      new Map([[43, { ...meta, chunkTotal: 1, transcriptSource: null, inferredDate: null }]]),
-    );
-    const rows = await engine.executeRaw<{ fm: Record<string, unknown> }>(
-      `SELECT frontmatter AS fm FROM pages WHERE slug = $1`, [slug],
-    );
-    const fm = rows[0].fm as Record<string, unknown>;
-    expect(fm.transcript_id).toBe('session-uuid');
-    expect(fm.chunk).toBeUndefined();
-    expect(fm.transcript_source).toBeUndefined();
-    expect(fm.date).toBeUndefined();
-  });
-});

test/cycle-synthesize.test.ts

@@ -302,7 +302,6 @@ describe('judgeSignificance', () => {
       content: 'A short conversation about something interesting.',
       basename: 'x',
       inferredDate: null,
-      transcriptSource: null,
     };
   }
 
@@ -416,7 +415,6 @@ describe('judgeSignificance — UTF-16 safety (v0.41.13)', () => {
       content,
       basename: 'long',
       inferredDate: null,
-      transcriptSource: null,
     };
   }
 

test/cycle/extract-atoms-synthesize-concepts.test.ts

@@ -17,6 +17,7 @@ import { runPhaseExtractAtoms, parseAtomsResponse } from '../../src/core/cycle/e
 import { runPhaseSynthesizeConcepts } from '../../src/core/cycle/synthesize-concepts.ts';
 import { resetPgliteState } from '../helpers/reset-pglite.ts';
 import type { ChatResult, ChatOpts } from '../../src/core/ai/gateway.ts';
+import type { BrainEngine } from '../../src/core/engine.ts';
 
 let engine: PGLiteEngine;
 
@@ -177,6 +178,180 @@ describe('v0.41 T5: runPhaseExtractAtoms via stubbed chat', () => {
     expect((result.details?.failures as unknown[]).length).toBe(1);
   });
 
+  // ── #2750: caller deadline bounds the phase ────────────────────────────
+
+  test('caller deadline aborts a hung chat before processing the next item', async () => {
+    let calls = 0;
+    const chat = async (opts: ChatOpts) => {
+      calls++;
+      return await new Promise<never>((_resolve, reject) => {
+        const signal = opts.abortSignal;
+        if (!signal) return reject(new Error('missing abort signal'));
+        if (signal.aborted) return reject(signal.reason);
+        signal.addEventListener('abort', () => reject(signal.reason), { once: true });
+      });
+    };
+    const started = Date.now();
+    const result = await runPhaseExtractAtoms(engine, {
+      _transcripts: [
+        { filePath: '/hung.txt', content: 'a', contentHash: 'hung-a' },
+        { filePath: '/never.txt', content: 'b', contentHash: 'hung-b' },
+      ],
+      _pages: [],
+      _chat: chat as typeof import('../../src/core/ai/gateway.ts').chat,
+      abortSignal: AbortSignal.timeout(25),
+    });
+    expect(Date.now() - started).toBeLessThan(2_000);
+    expect(calls).toBe(1);
+    expect(result.status).toBe('ok');
+    expect(result.details?.deadline_aborted).toBe(true);
+    expect(result.details?.atoms_extracted).toBe(0);
+    expect(result.details?.failures).toEqual([]);
+  });
+
+  test('billable chat usage is counted when the deadline fires as the response resolves', async () => {
+    const controller = new AbortController();
+    const chat = async (opts: ChatOpts): Promise<ChatResult> => {
+      controller.abort(new DOMException('deadline', 'TimeoutError'));
+      return stubChat(`[{"title":"late","atom_type":"insight","body":"b"}]`, {
+        input_tokens: 1_000,
+        output_tokens: 500,
+      })(opts);
+    };
+    const result = await runPhaseExtractAtoms(engine, {
+      _transcripts: [{ filePath: '/late.txt', content: 'a', contentHash: 'late' }],
+      _pages: [],
+      _chat: chat,
+      abortSignal: controller.signal,
+    });
+    expect(result.details?.deadline_aborted).toBe(true);
+    expect(Number(result.details?.estimated_spend_usd)).toBeGreaterThan(0);
+    expect(result.details?.atoms_extracted).toBe(0);
+  });
+
+  test('deadline after partial progress still writes receipt and incomplete rollup', async () => {
+    const controller = new AbortController();
+    let calls = 0;
+    let notifySecondChat!: () => void;
+    const secondChatStarted = new Promise<void>((resolve) => { notifySecondChat = resolve; });
+    const chat = async (opts: ChatOpts): Promise<ChatResult> => {
+      calls++;
+      if (calls === 1) {
+        return stubChat(`[{"title":"committed","atom_type":"insight","body":"b"}]`)(opts);
+      }
+      notifySecondChat();
+      return await new Promise<never>((_resolve, reject) => {
+        const signal = opts.abortSignal;
+        if (!signal) return reject(new Error('missing abort signal'));
+        signal.addEventListener('abort', () => reject(signal.reason), { once: true });
+      });
+    };
+
+    const pending = runPhaseExtractAtoms(engine, {
+      _transcripts: [
+        { filePath: '/committed.txt', content: 'a', contentHash: 'committed-a' },
+        { filePath: '/hung.txt', content: 'b', contentHash: 'hung-b' },
+      ],
+      _pages: [],
+      _chat: chat,
+      abortSignal: controller.signal,
+    });
+    await secondChatStarted;
+    controller.abort(new DOMException('deadline', 'TimeoutError'));
+    const result = await pending;
+
+    const atoms = await engine.executeRaw<{ n: number }>(
+      `SELECT COUNT(*)::int AS n FROM pages WHERE type = 'atom'`,
+    );
+    const receipts = await engine.executeRaw<{ n: number }>(
+      `SELECT COUNT(*)::int AS n FROM pages WHERE type = 'extract_receipt'`,
+    );
+    const rollups = await engine.executeRaw<{
+      cost_usd: string | number;
+      round_completed_count: string | number;
+    }>(
+      `SELECT cost_usd, round_completed_count
+         FROM extract_rollup_7d
+        WHERE kind = 'atoms' AND source_id = 'default'`,
+    );
+    expect(result.details?.deadline_aborted).toBe(true);
+    expect(atoms[0].n).toBe(1);
+    expect(receipts[0].n).toBe(1);
+    expect(Number(rollups[0].cost_usd)).toBeGreaterThan(0);
+    expect(Number(rollups[0].round_completed_count)).toBe(0);
+  });
+
+  test('bookkeeping runs on a fresh grace signal, not the fired work deadline', async () => {
+    const controller = new AbortController();
+    let putCalls = 0;
+    let receiptSignal: AbortSignal | undefined;
+    let rollupSignal: AbortSignal | undefined;
+    const signalAwareEngine = {
+      executeRaw: async (sql: string, _params?: unknown[], opts?: { signal?: AbortSignal }) => {
+        if (sql.includes('INSERT INTO extract_rollup_7d')) rollupSignal = opts?.signal;
+        return [];
+      },
+      putPage: async (_slug: string, _page: unknown, opts?: { signal?: AbortSignal }) => {
+        putCalls++;
+        if (putCalls === 1) {
+          // Atom write in flight; the work deadline fires before bookkeeping.
+          controller.abort(new DOMException('work deadline', 'TimeoutError'));
+        } else {
+          receiptSignal = opts?.signal;
+        }
+        return {};
+      },
+    } as unknown as BrainEngine;
+
+    const result = await runPhaseExtractAtoms(signalAwareEngine, {
+      _transcripts: [{ filePath: '/one.txt', content: 'a', contentHash: 'one' }],
+      _pages: [],
+      _chat: stubChat(`[{"title":"one","atom_type":"insight","body":"b"}]`),
+      abortSignal: controller.signal,
+    });
+
+    expect(result.details?.atoms_extracted).toBe(1);
+    expect(putCalls).toBe(2); // atom write + receipt write
+    expect(receiptSignal).toBeDefined();
+    expect(receiptSignal).not.toBe(controller.signal);
+    expect(receiptSignal?.aborted).toBe(false);
+    expect(rollupSignal).toBe(receiptSignal);
+  });
+
+  test('caller deadline cancels a hung atom write and stops the phase', async () => {
+    const controller = new AbortController();
+    let notifyWriteStarted!: () => void;
+    const writeStarted = new Promise<void>((resolve) => { notifyWriteStarted = resolve; });
+    let writeCalls = 0;
+    const signalAwareEngine = {
+      executeRaw: async () => [],
+      putPage: async (_slug: string, _page: unknown, opts?: { signal?: AbortSignal }) => {
+        writeCalls++;
+        notifyWriteStarted();
+        return await new Promise<never>((_resolve, reject) => {
+          const signal = opts?.signal;
+          if (!signal) return reject(new Error('missing abort signal'));
+          if (signal.aborted) return reject(signal.reason);
+          signal.addEventListener('abort', () => reject(signal.reason), { once: true });
+        });
+      },
+    } as unknown as BrainEngine;
+
+    const pending = runPhaseExtractAtoms(signalAwareEngine, {
+      _transcripts: [{ filePath: '/hung-write.txt', content: 'a', contentHash: 'hung-write' }],
+      _pages: [],
+      _chat: stubChat(`[{"title":"hung write","atom_type":"insight","body":"b"}]`),
+      abortSignal: controller.signal,
+    });
+    await writeStarted;
+    controller.abort(new DOMException('deadline', 'TimeoutError'));
+    const result = await pending;
+
+    expect(writeCalls).toBe(1);
+    expect(result.details?.deadline_aborted).toBe(true);
+    expect(result.details?.atoms_extracted).toBe(0);
+  });
+
   // v0.41.2.1 regression case (D9 #14 wording): with _pages:[] and same
   // _transcripts, all PRE-EXISTING PhaseResult.details fields match
   // pre-fix values byte-for-byte. The new fields (pages_processed,

test/cycle/synthesize-gateway-adapter.test.ts

@@ -45,7 +45,6 @@ const FIXTURE_TRANSCRIPT: DiscoveredTranscript = {
   content: 'Synthetic transcript content for gateway-adapter parity tests.',
   contentHash: 'sha-fixture-1',
   inferredDate: '2026-05-24',
-  transcriptSource: null,
 };
 
 describe('makeJudgeClient — construction-time provider probe', () => {

test/cycle/transcript-discovery-metadata.test.ts

@@ -1,109 +0,0 @@
-/**
- * #2285 — transcript metadata discovery.
- *
- * Pins the two discovery-side additions:
- *   1. `transcriptSource` — derived from the `<source>/<date>/<file>` path
- *      layout; null for ad-hoc inputs that don't match.
- *   2. Content-based date inference — the `| First message | <ISO> |` row in
- *      the transcript's `## Metadata` table wins over the filename-regex
- *      date (stable across mtime-restamping re-syncs); filename is the
- *      fallback.
- *
- * Pure filesystem; no engine, no LLM.
- */
-
-import { describe, test, expect, beforeEach, afterEach } from 'bun:test';
-import { mkdtempSync, rmSync, writeFileSync, mkdirSync } from 'node:fs';
-import { tmpdir } from 'node:os';
-import { join, dirname } from 'node:path';
-import {
-  discoverTranscripts,
-  readSingleTranscript,
-  deriveTranscriptSource,
-  inferContentDate,
-} from '../../src/core/cycle/transcript-discovery.ts';
-
-let tmpDir: string;
-
-beforeEach(() => {
-  tmpDir = mkdtempSync(join(tmpdir(), 'gbrain-transcript-meta-'));
-});
-
-afterEach(() => {
-  rmSync(tmpDir, { recursive: true, force: true });
-});
-
-function write(relPath: string, body: string): string {
-  const full = join(tmpDir, relPath);
-  mkdirSync(dirname(full), { recursive: true });
-  writeFileSync(full, body);
-  return full;
-}
-
-const FILLER = 'User: hello world. '.repeat(200);
-const METADATA_BLOCK =
-  '## Metadata\n\n| Key | Value |\n| --- | --- |\n| First message | 2026-05-15T03:51:11.584Z |\n\n';
-
-describe('deriveTranscriptSource', () => {
-  test('extracts the source slug from <source>/<date>/<file> layout', () => {
-    expect(deriveTranscriptSource('/corpus/claude-code/2026-06-12/abc.md')).toBe('claude-code');
-    expect(deriveTranscriptSource('/corpus/voice-notes/2026-06-12/xyz.md')).toBe('voice-notes');
-  });
-
-  test('null when the parent dir is not a date dir or grandparent is not a slug', () => {
-    expect(deriveTranscriptSource('/corpus/flat-file.md')).toBeNull();
-    expect(deriveTranscriptSource('/corpus/claude-code/not-a-date/abc.md')).toBeNull();
-    expect(deriveTranscriptSource('/corpus/Not A Slug/2026-06-12/abc.md')).toBeNull();
-  });
-});
-
-describe('inferContentDate', () => {
-  test('parses the | First message | row', () => {
-    expect(inferContentDate(METADATA_BLOCK)).toBe('2026-05-15');
-  });
-  test('null when absent', () => {
-    expect(inferContentDate(FILLER)).toBeNull();
-  });
-});
-
-describe('discoverTranscripts — transcriptSource + date cascade', () => {
-  test('populates transcriptSource per file; null for flat files', () => {
-    write('claude-code/2026-06-12/aaaa.md', FILLER);
-    write('2026-06-12-flat.md', FILLER);
-    const out = discoverTranscripts({ corpusDir: tmpDir, minChars: 100 });
-    const byBase = new Map(out.map(t => [t.basename, t.transcriptSource]));
-    expect(byBase.get('aaaa')).toBe('claude-code');
-    expect(byBase.get('2026-06-12-flat')).toBeNull();
-  });
-
-  test('content First-message date wins over the filename date', () => {
-    write('2026-01-01-named.md', METADATA_BLOCK + FILLER);
-    const out = discoverTranscripts({ corpusDir: tmpDir, minChars: 100 });
-    expect(out).toHaveLength(1);
-    expect(out[0].inferredDate).toBe('2026-05-15');
-  });
-
-  test('filename date remains the fallback when content has no metadata row', () => {
-    write('2026-01-01-named.md', FILLER);
-    const out = discoverTranscripts({ corpusDir: tmpDir, minChars: 100 });
-    expect(out[0].inferredDate).toBe('2026-01-01');
-  });
-
-  test('date filter matches on the content date for UUID-named transcripts', () => {
-    write('claude-code/2026-05-15/uuid-basename.md', METADATA_BLOCK + FILLER);
-    const hit = discoverTranscripts({ corpusDir: tmpDir, minChars: 100, date: '2026-05-15' });
-    expect(hit).toHaveLength(1);
-    const miss = discoverTranscripts({ corpusDir: tmpDir, minChars: 100, date: '2026-05-16' });
-    expect(miss).toHaveLength(0);
-  });
-});
-
-describe('readSingleTranscript — same metadata surface', () => {
-  test('carries transcriptSource and prefers the content date', () => {
-    const p = write('claude-code/2026-05-15/2026-01-01-single.md', METADATA_BLOCK + FILLER);
-    const t = readSingleTranscript(p, { minChars: 100 });
-    expect(t).not.toBeNull();
-    expect(t!.transcriptSource).toBe('claude-code');
-    expect(t!.inferredDate).toBe('2026-05-15');
-  });
-});

test/extract-atoms-drain.test.ts

@@ -43,26 +43,135 @@ describe('runExtractAtomsDrain (issue #1678)', () => {
     expect(batches).toBe(3);
   });
 
-  it('stops at the wallclock window with remaining > 0', async () => {
-    // SYNC stepping clock: now() #1 sets deadline (0+100=100); the while-check
-    // then sees 50, 50 (two batches), then 999999 → past deadline → stop.
-    const times = [0, 50, 50, 999_999];
-    let ti = 0;
-    const now = () => times[Math.min(ti++, times.length - 1)];
+  it('stops at the wallclock window; remaining is unknown (no post-window count)', async () => {
+    // Each batch consumes 60ms of the 100ms window: two batches fit, the
+    // third boundary check sees 120 ≥ 100 and stops. #2750: after the window
+    // elapses the final countRemaining is SKIPPED (it would overrun the
+    // window), so remaining reports null.
+    let now = 0;
     const result = await runExtractAtomsDrain(
       {
         withLock: passThroughLock,
         countRemaining: async () => 5, // never drains
-        runBatch: async () => ({ extracted: 1, skipped: 0 }),
-        now,
+        runBatch: async () => {
+          now += 60;
+          return { extracted: 1, skipped: 0 };
+        },
+        now: () => now,
       },
       { windowMs: 100 },
     );
     expect(result.stopped).toBe('window');
-    expect(result.remaining).toBe(5);
+    expect(result.remaining).toBeNull();
     expect(result.batches).toBe(2);
   });
 
+  it('passes one drain-level deadline signal into count and batch', async () => {
+    const seen: AbortSignal[] = [];
+    const controller = new AbortController();
+    let now = 0;
+    const result = await runExtractAtomsDrain(
+      {
+        withLock: passThroughLock,
+        countRemaining: async (signal) => {
+          seen.push(signal);
+          return 5;
+        },
+        runBatch: async (signal) => {
+          seen.push(signal);
+          now = 100;
+          return { extracted: 1, skipped: 0 };
+        },
+        now: () => now,
+      },
+      { windowMs: 100, abortSignal: controller.signal },
+    );
+    expect(result.stopped).toBe('window');
+    expect(result.batches).toBe(1);
+    expect(seen.length).toBe(2);
+    expect(seen[0]).toBe(seen[1]);
+    // Combined (timeout + external) signal, not the raw external one.
+    expect(seen[0]).not.toBe(controller.signal);
+  });
+
+  it('aborts a hung backlog count at the window deadline and releases the lock', async () => {
+    let released = false;
+    const result = await runExtractAtomsDrain(
+      {
+        withLock: async (work) => {
+          try { return await work(); }
+          finally { released = true; }
+        },
+        // Hangs until the drain's real-time deadline signal fires (10ms).
+        countRemaining: (signal) => new Promise((_resolve, reject) => {
+          signal.addEventListener('abort', () => reject(signal.reason), { once: true });
+        }),
+        runBatch: async () => ({ extracted: 0, skipped: 0 }),
+        now: () => 0, // injected clock never advances — the SIGNAL must save us
+      },
+      { windowMs: 10 },
+    );
+    expect(result.stopped).toBe('window');
+    expect(result.remaining).toBeNull();
+    expect(released).toBe(true);
+  });
+
+  it('rethrows external cancellation after releasing the lock', async () => {
+    const controller = new AbortController();
+    let released = false;
+    const pending = runExtractAtomsDrain(
+      {
+        withLock: async (work) => {
+          try { return await work(); }
+          finally { released = true; }
+        },
+        countRemaining: (signal) => new Promise((_resolve, reject) => {
+          signal.addEventListener('abort', () => reject(signal.reason), { once: true });
+        }),
+        runBatch: async () => ({ extracted: 0, skipped: 0 }),
+        now: () => 0,
+      },
+      { windowMs: 1_000_000, abortSignal: controller.signal },
+    );
+    controller.abort(new DOMException('worker timeout', 'AbortError'));
+    await expect(pending).rejects.toThrow('worker timeout');
+    expect(released).toBe(true);
+  });
+
+  it('classifies a deadline-exhausted zero-progress batch as window, not no_progress', async () => {
+    let now = 0;
+    const result = await runExtractAtomsDrain(
+      {
+        withLock: passThroughLock,
+        countRemaining: async () => 5,
+        runBatch: async () => {
+          now = 100; // batch consumed the whole window and returned nothing
+          return { extracted: 0, skipped: 0 };
+        },
+        now: () => now,
+      },
+      { windowMs: 100 },
+    );
+    expect(result.stopped).toBe('window');
+    expect(result.batches).toBe(1);
+  });
+
+  it('bounds a hung lock acquisition with the drain deadline signal', async () => {
+    const started = Date.now();
+    await expect(runExtractAtomsDrain(
+      {
+        withLock: (_work, signal) => new Promise((_resolve, reject) => {
+          signal.addEventListener('abort', () => reject(signal.reason), { once: true });
+        }),
+        countRemaining: async () => 1,
+        runBatch: async () => ({ extracted: 0, skipped: 0 }),
+        now: Date.now,
+      },
+      { windowMs: 10 },
+    )).rejects.toThrow();
+    expect(Date.now() - started).toBeLessThan(1_000);
+  });
+
   it('stops on a zero-progress batch (no hot loop)', async () => {
     let batches = 0;
     const result = await runExtractAtomsDrain(
@@ -133,4 +242,17 @@ describe('shared wiring helper holds the cycle lock (5A)', () => {
     expect(src).toContain('cycleLockIdFor(opts.sourceId)');
     expect(src).toContain('withRefreshingLock(engine, lockId');
   });
+
+  // #2750: the deadline signal must reach the phase, the backlog count, AND
+  // the lock wrapper — and the transcript path (brainDir) must stay wired
+  // exactly as the routine callers expect (PR #2752 takeover reverted its
+  // unsanctioned transcript-suppression scope change).
+  it('threads the drain deadline signal through phase, count, and lock', () => {
+    const jobsSrc = readFileSync(join(import.meta.dir, '../src/commands/jobs.ts'), 'utf8');
+    expect(src).toContain('abortSignal: signal');
+    expect(src).toContain('countExtractAtomsBacklog(engine, extractionSourceId, signal)');
+    expect(src).toContain('brainDir: opts.brainDir');
+    expect(src).not.toContain('_transcripts');
+    expect(jobsSrc).toContain('abortSignal: job.signal');
+  });
 });

test/fixtures/supervisor-runner.ts

@@ -24,15 +24,18 @@ import type { BrainEngine } from '../../src/core/engine.ts';
 // Mock engine: healthCheck() calls engine.executeRaw; return empty rows so
 // the query path exercises without needing Postgres.
 //
-// #1849: start() now acquires the queue-scoped DB singleton lock via
-// tryAcquireDbLock, which uses the postgres `sql` tagged-template escape hatch.
-// The stub returns a single row from every call so acquire succeeds (length 1
-// → acquired) and refresh/release are no-ops. Each spawned runner is a fresh
-// process, so there's no cross-test lock state to clean up.
+// #1849: start() acquires the queue-scoped DB singleton lock via
+// tryAcquireDbLock. #2750 routed the acquire upsert through engine.executeRaw
+// (signal-boundable) and release through engine.executeRawDirect, so the
+// stub returns a single row from the lock upsert (length 1 → acquired) and
+// empty rows everywhere else. Each spawned runner is a fresh process, so
+// there's no cross-test lock state to clean up.
 const sqlStub = (..._args: unknown[]) => Promise.resolve([{ id: 'supervisor-lock' }]);
 const mockEngine: Partial<BrainEngine> = {
   kind: 'postgres' as const,
-  executeRaw: async () => [],
+  executeRaw: async (query: string) =>
+    query.includes('gbrain_cycle_locks') ? [{ id: 'supervisor-lock' }] : [],
+  executeRawDirect: async () => [],
   sql: sqlStub,
 } as unknown as BrainEngine;
 

test/postgres-execute-raw-direct.test.ts

@@ -98,14 +98,39 @@ describe('PostgresEngine.executeRawDirect — routing decision (PR #1816)', () =
   });
 
   test('already-aborted signal short-circuits with AbortError before routing the query', async () => {
-    const readConn = fakeSql('read');
+    let unsafeCalls = 0;
+    let ddlCalls = 0;
+    const readConn: FakeSql = { unsafe: async () => { unsafeCalls++; return []; } };
     const directConn = fakeSql('direct');
     const engine = makeEngine({ dualPoolActive: true, readConn, directConn });
+    const e = engine as unknown as { connectionManager: { ddl: () => Promise<FakeSql> } };
+    e.connectionManager.ddl = async () => { ddlCalls++; return directConn; };
 
     const ac = new AbortController();
     ac.abort();
     await expect(
       engine.executeRawDirect('UPDATE minion_jobs SET x=1', [], { signal: ac.signal }),
     ).rejects.toThrow(/abort/i);
+    // #2750: short-circuits BEFORE pool routing — no ddl(), no unsafe().
+    expect(ddlCalls).toBe(0);
+    expect(unsafeCalls).toBe(0);
+  });
+
+  test('#2750: signal bounds a stalled direct-pool acquisition before unsafe starts', async () => {
+    let unsafeCalls = 0;
+    const readConn: FakeSql = { unsafe: async () => { unsafeCalls++; return []; } };
+    const directConn = fakeSql('direct');
+    const engine = makeEngine({ dualPoolActive: true, readConn, directConn });
+    const e = engine as unknown as { connectionManager: { ddl: () => Promise<FakeSql> } };
+    e.connectionManager.ddl = () => new Promise<FakeSql>(() => {}); // pooler exhausted: never resolves
+
+    const started = Date.now();
+    await expect(engine.executeRawDirect(
+      'DELETE FROM gbrain_cycle_locks',
+      [],
+      { signal: AbortSignal.timeout(10) },
+    )).rejects.toThrow(/abort/i);
+    expect(Date.now() - started).toBeLessThan(1_000);
+    expect(unsafeCalls).toBe(0);
   });
 });

test/progress.test.ts

@@ -216,21 +216,17 @@ describe('progress reporter', () => {
   });
 
   test('only one process-level signal handler installed across many reporters', () => {
-    // Baseline: one handler already installed by prior tests in this file, and
-    // possibly live reporters from OTHER test files sharing this bun process
-    // (shard composition is not this test's invariant — assert the delta, not
-    // an absolute zero, or shard reshuffles make this fail spuriously).
+    // Baseline: one handler already installed by prior tests in this file.
     const installedBefore = __signalHandlerInstalledForTest();
-    const liveBefore = __liveReporterCountForTest();
     const { stream } = sink(false);
     for (let i = 0; i < 50; i++) {
       const p = createProgress({ mode: 'json', stream, minIntervalMs: 0, minItems: 1 });
       p.start(`phase_${i}`, 1);
       p.finish();
     }
-    // After 50 reporter lifecycles, still exactly one handler and zero NET leaked live entries.
+    // After 50 reporter lifecycles, still exactly one handler and zero leaked live entries.
     expect(__signalHandlerInstalledForTest()).toBe(installedBefore || true);
-    expect(__liveReporterCountForTest()).toBe(liveBefore);
+    expect(__liveReporterCountForTest()).toBe(0);
   });
 
   test('startHeartbeat() fires heartbeats and stop() clears', async () => {